(17 nodes) Regulation of glial cell proliferation network (Taeniopygia guttata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100230978	FERM domain-containing protein. (660 aa)
	RNF10	Ring finger protein 10. (802 aa)
	SLC7A5	Solute carrier family 7 member 5. (522 aa)
	VEGFC	Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. (468 aa)
	NTN1	Netrin 1. (606 aa)
	IL1B	Interleukin-1; Belongs to the IL-1 family. (299 aa)
	SKI	SKI proto-oncogene. (714 aa)
	IL6	Interleukin 6. (221 aa)
	PLAG1	PLAG1 zinc finger. (501 aa)
	ENSTGUP00000031243	annotation not available (686 aa)
	ENSTGUP00000032655	annotation not available (422 aa)
	NF2	Neurofibromin 2. (595 aa)
	RB1	RB transcriptional corepressor 1. (931 aa)
	ABCC8	ATP binding cassette subfamily C member 8. (1620 aa)
	ENSTGUP00000021498	annotation not available (382 aa)
	ENSTGUP00000021519	annotation not available (333 aa)
	LYN	Tyrosine-protein kinase. (605 aa)

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTGUP00000021498	IL1B	ENSTGUP00000021498	ENSTGUP00000003479	annotation not available	Interleukin-1; Belongs to the IL-1 family.	0.444
ENSTGUP00000021498	SKI	ENSTGUP00000021498	ENSTGUP00000003040	annotation not available	SKI proto-oncogene.	0.409
ENSTGUP00000021519	RB1	ENSTGUP00000021519	ENSTGUP00000012584	annotation not available	RB transcriptional corepressor 1.	0.470
ENSTGUP00000031243	IL1B	ENSTGUP00000031243	ENSTGUP00000003479	annotation not available	Interleukin-1; Belongs to the IL-1 family.	0.444
ENSTGUP00000031243	SKI	ENSTGUP00000031243	ENSTGUP00000003040	annotation not available	SKI proto-oncogene.	0.409
ENSTGUP00000032655	RB1	ENSTGUP00000032655	ENSTGUP00000012584	annotation not available	RB transcriptional corepressor 1.	0.470
IL1B	ENSTGUP00000021498	ENSTGUP00000003479	ENSTGUP00000021498	Interleukin-1; Belongs to the IL-1 family.	annotation not available	0.444
IL1B	ENSTGUP00000031243	ENSTGUP00000003479	ENSTGUP00000031243	Interleukin-1; Belongs to the IL-1 family.	annotation not available	0.444
IL1B	IL6	ENSTGUP00000003479	ENSTGUP00000002805	Interleukin-1; Belongs to the IL-1 family.	Interleukin 6.	0.798
IL1B	VEGFC	ENSTGUP00000003479	ENSTGUP00000006624	Interleukin-1; Belongs to the IL-1 family.	Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family.	0.461
IL6	IL1B	ENSTGUP00000002805	ENSTGUP00000003479	Interleukin 6.	Interleukin-1; Belongs to the IL-1 family.	0.798
LOC100230978	NF2	ENSTGUP00000025196	ENSTGUP00000010812	FERM domain-containing protein.	Neurofibromin 2.	0.901
NF2	LOC100230978	ENSTGUP00000010812	ENSTGUP00000025196	Neurofibromin 2.	FERM domain-containing protein.	0.901
RB1	ENSTGUP00000021519	ENSTGUP00000012584	ENSTGUP00000021519	RB transcriptional corepressor 1.	annotation not available	0.470
RB1	ENSTGUP00000032655	ENSTGUP00000012584	ENSTGUP00000032655	RB transcriptional corepressor 1.	annotation not available	0.470
SKI	ENSTGUP00000021498	ENSTGUP00000003040	ENSTGUP00000021498	SKI proto-oncogene.	annotation not available	0.409
SKI	ENSTGUP00000031243	ENSTGUP00000003040	ENSTGUP00000031243	SKI proto-oncogene.	annotation not available	0.409
VEGFC	IL1B	ENSTGUP00000006624	ENSTGUP00000003479	Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family.	Interleukin-1; Belongs to the IL-1 family.	0.461