STRINGSTRING
LHX1 LHX1 SIRT6 SIRT6 SMO SMO HGF HGF AR AR SOX9 SOX9 SIX2 SIX2 LGR4 LGR4 CTNNB1 CTNNB1 LOC105759937 LOC105759937 NTN4 NTN4 AGT AGT LHX5 LHX5 MDK MDK ESR1 ESR1 SULF1 SULF1 HOXD13 HOXD13 FGF7 FGF7 LRRK2 LRRK2 SIX4 SIX4 SOX8 SOX8 GDNF GDNF FKBPL FKBPL BCL11A BCL11A SIX1 SIX1 BTBD7 BTBD7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LHX1LIM homeobox 1. (406 aa)
SIRT6Sirtuin 6. (348 aa)
SMOSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (778 aa)
HGFHepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. (726 aa)
ARAndrogen receptor. (684 aa)
SOX9SRY-box transcription factor 9. (474 aa)
SIX2SIX homeobox 2. (287 aa)
LGR4Leucine rich repeat containing G protein-coupled receptor 4. (950 aa)
CTNNB1Catenin beta 1. (781 aa)
LOC105759937Uncharacterized protein. (638 aa)
NTN4Netrin 4. (615 aa)
AGTAngiotensinogen; Belongs to the serpin family. (462 aa)
LHX5LIM homeobox 5. (420 aa)
MDKMidkine. (139 aa)
ESR1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues; Belongs to the nuclear hormone receptor family. NR3 subfamily. (621 aa)
SULF1Extracellular sulfatase. (1120 aa)
HOXD13Homeobox domain-containing protein. (312 aa)
FGF7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (194 aa)
LRRK2Leucine rich repeat kinase 2. (2509 aa)
SIX4SIX homeobox 4. (749 aa)
SOX8SRY-box transcription factor 8. (470 aa)
GDNFGlial cell derived neurotrophic factor. (218 aa)
FKBPLFKBP prolyl isomerase like. (598 aa)
BCL11ABAF chromatin remodeling complex subunit BCL11A. (744 aa)
SIX1Homeobox protein SIX1. (282 aa)
BTBD7BTB domain containing 7. (1159 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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