54 items (Taeniopygia guttata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSTGUP00000027369	annotation not available (253 aa)
	ENSTGUP00000028260	annotation not available (531 aa)
	SYT3	Uncharacterized protein. (529 aa)
	FOS	Fos proto-oncogene, AP-1 transcription factor subunit. (370 aa)
	SYT12	Synaptotagmin 12. (472 aa)
	LOC100225533	Uncharacterized protein. (188 aa)
	CPNE8	Copine 8. (639 aa)
	LOC100230025	Ras-GAP domain-containing protein. (860 aa)
	CAPN3	Calpain 3; Belongs to the peptidase C2 family. (809 aa)
	PRKAA1	Non-specific serine/threonine protein kinase. (561 aa)
	CPNE4	Copine 4. (578 aa)
	LOC115493197	Protein fosB isoform X1. (310 aa)
	ALOX5AP	Arachidonate 5-lipoxygenase activating protein. (161 aa)
	RASAL1	RAS protein activator like 1. (956 aa)
	SMPD1	Uncharacterized protein. (622 aa)
	SYT4	Uncharacterized protein. (571 aa)
	ADGRV1	Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family. (6252 aa)
	ENSTGUP00000036312	annotation not available (479 aa)
	MEF2C	Myocyte enhancer factor 2C. (244 aa)
	SYT6	Synaptotagmin 6. (520 aa)
	SYT17	Synaptotagmin 17. (474 aa)
	SYT8	Synaptotagmin 8. (393 aa)
	CPNE9	Copine family member 9. (545 aa)
	SYT1	Synaptotagmin I. (425 aa)
	ADCY1	Adenylate cyclase type 1; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1142 aa)
	PKD2	Uncharacterized protein. (903 aa)
	LOC115492493	Uncharacterized protein. (199 aa)
	SYT2	Synaptotagmin 2. (415 aa)
	CLIC4	Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (253 aa)
	SYT7	Synaptotagmin 7. (684 aa)
	GPLD1	Zn_dep_PLPC domain-containing protein. (834 aa)
	TRPM2	Transient receptor potential cation channel subfamily M member 2. (1541 aa)
	LOC100226015	Uncharacterized protein. (536 aa)
	CPNE2	Copine 2. (544 aa)
	SYT11	Synaptotagmin 11. (484 aa)
	ACER1	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (263 aa)
	SYT13	Synaptotagmin 13. (431 aa)
	MEF2A	Myocyte enhancer factor 2A. (496 aa)
	ADD1	Adducin 1. (861 aa)
	CPNE7	Copine-7. (569 aa)
	EEF2K	Eukaryotic elongation factor 2 kinase. (736 aa)
	SYT10	Synaptotagmin 10. (522 aa)
	PRKAA2	Non-specific serine/threonine protein kinase. (552 aa)
	ECT2	Uncharacterized protein. (985 aa)
	CARF	Calcium responsive transcription factor. (711 aa)
	CRHBP	Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family. (330 aa)
	ITPKB	Kinase; Belongs to the inositol phosphokinase (IPK) family. (605 aa)
	NCSTN	Nicastrin. (879 aa)
	SYT9	Uncharacterized protein. (519 aa)
	LOC115492493-2	Guanylyl cyclase-activating protein 1. (199 aa)
	LGMN	Uncharacterized protein. (431 aa)
	ADCY8	Adenylate cyclase 8; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (1319 aa)
	ITPKA	Kinase; Belongs to the inositol phosphokinase (IPK) family. (482 aa)
	ENSTGUP00000026711	annotation not available (119 aa)

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACER1	SMPD1	ENSTGUP00000018371	ENSTGUP00000035086	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.	Uncharacterized protein.	0.919
ADCY1	ADCY8	ENSTGUP00000007377	ENSTGUP00000025787	Adenylate cyclase type 1; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Adenylate cyclase 8; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	0.959
ADCY8	ADCY1	ENSTGUP00000025787	ENSTGUP00000007377	Adenylate cyclase 8; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Adenylate cyclase type 1; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	0.959
ENSTGUP00000027369	ENSTGUP00000036312	ENSTGUP00000027369	ENSTGUP00000036312	annotation not available	annotation not available	0.924
ENSTGUP00000027369	FOS	ENSTGUP00000027369	ENSTGUP00000029395	annotation not available	Fos proto-oncogene, AP-1 transcription factor subunit.	0.820
ENSTGUP00000036312	ENSTGUP00000027369	ENSTGUP00000036312	ENSTGUP00000027369	annotation not available	annotation not available	0.924
ENSTGUP00000036312	FOS	ENSTGUP00000036312	ENSTGUP00000029395	annotation not available	Fos proto-oncogene, AP-1 transcription factor subunit.	0.917
ENSTGUP00000036312	LOC115493197	ENSTGUP00000036312	ENSTGUP00000034629	annotation not available	Protein fosB isoform X1.	0.924
FOS	ENSTGUP00000027369	ENSTGUP00000029395	ENSTGUP00000027369	Fos proto-oncogene, AP-1 transcription factor subunit.	annotation not available	0.820
FOS	ENSTGUP00000036312	ENSTGUP00000029395	ENSTGUP00000036312	Fos proto-oncogene, AP-1 transcription factor subunit.	annotation not available	0.917
FOS	LOC115493197	ENSTGUP00000029395	ENSTGUP00000034629	Fos proto-oncogene, AP-1 transcription factor subunit.	Protein fosB isoform X1.	0.822
ITPKA	ITPKB	ENSTGUP00000026290	ENSTGUP00000004452	Kinase; Belongs to the inositol phosphokinase (IPK) family.	Kinase; Belongs to the inositol phosphokinase (IPK) family.	0.903
ITPKB	ITPKA	ENSTGUP00000004452	ENSTGUP00000026290	Kinase; Belongs to the inositol phosphokinase (IPK) family.	Kinase; Belongs to the inositol phosphokinase (IPK) family.	0.903
LOC100225533	LOC115492493	ENSTGUP00000030020	ENSTGUP00000001523	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC115492493	LOC100225533	ENSTGUP00000001523	ENSTGUP00000030020	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC115493197	ENSTGUP00000036312	ENSTGUP00000034629	ENSTGUP00000036312	Protein fosB isoform X1.	annotation not available	0.924
LOC115493197	FOS	ENSTGUP00000034629	ENSTGUP00000029395	Protein fosB isoform X1.	Fos proto-oncogene, AP-1 transcription factor subunit.	0.822
PKD2	TRPM2	ENSTGUP00000002298	ENSTGUP00000006181	Uncharacterized protein.	Transient receptor potential cation channel subfamily M member 2.	0.426
PRKAA1	PRKAA2	ENSTGUP00000033501	ENSTGUP00000009883	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.974
PRKAA2	PRKAA1	ENSTGUP00000009883	ENSTGUP00000033501	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.974