STRINGSTRING
GP9 GP9 SLIT3 SLIT3 LINGO2 LINGO2 LRRTM3 LRRTM3 LRRC3B LRRC3B FLRT2 FLRT2 LINGO3 LINGO3 CHAD CHAD FMOD FMOD LRRC52 LRRC52 LRRTM1 LRRTM1 SLIT1 SLIT1 SLIT2 SLIT2 PODN PODN MXRA5 MXRA5 OMG OMG DCN DCN LUM LUM KERA KERA EPYC EPYC LGR5 LGR5 NYX NYX LRIG3 LRIG3 LRRC3 LRRC3 LRIT1 LRIT1 RXFP1 RXFP1 ASPN ASPN LGR4 LGR4 LGR6 LGR6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GP9Glycoprotein IX platelet. (245 aa)
SLIT3Slit guidance ligand 3. (1516 aa)
LINGO2Leucine rich repeat and Ig domain containing 2. (633 aa)
LRRTM3Leucine rich repeat transmembrane neuronal 3. (597 aa)
LRRC3BPutative leucine-rich repeat protein (LRP15). (259 aa)
FLRT2Fibronectin leucine rich transmembrane protein 2. (661 aa)
LINGO3Leucine rich repeat and Ig domain containing 3. (604 aa)
CHADUncharacterized protein. (392 aa)
FMODFibromodulin. (382 aa)
LRRC52LRRNT domain-containing protein. (409 aa)
LRRTM1Leucine rich repeat transmembrane neuronal 1. (485 aa)
SLIT1Slit guidance ligand 1. (1538 aa)
SLIT2Slit guidance ligand 2. (1541 aa)
PODNPodocan. (553 aa)
MXRA5Matrix remodeling associated 5. (2895 aa)
OMGOligodendrocyte myelin glycoprotein. (423 aa)
DCNDecorin; May affect the rate of fibrils formation. (382 aa)
LUMLumican. (343 aa)
KERAKeratocan. (352 aa)
EPYCEpiphycan. (316 aa)
LGR5Leucine rich repeat containing G protein-coupled receptor 5. (910 aa)
NYXNyctalopin. (480 aa)
LRIG3Leucine rich repeats and immunoglobulin like domains 3. (1104 aa)
LRRC3Leucine rich repeat containing 3. (239 aa)
LRIT1Leucine rich repeat, Ig-like and transmembrane domains 1. (626 aa)
RXFP1Relaxin family peptide receptor 1. (766 aa)
ASPNAsporin. (370 aa)
LGR4Leucine rich repeat containing G protein-coupled receptor 4. (950 aa)
LGR6Leucine rich repeat containing G protein-coupled receptor 6. (930 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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