(7 nodes) MIT domain network (Taeniopygia guttata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100225100	Unc-51 like kinase 3. (468 aa)
	SPART	Spartin. (639 aa)
	RPS6KC1	Ribosomal protein S6 kinase C1. (1081 aa)
	VPS4A	AAA domain-containing protein. (446 aa)
	MITD1	Microtubule interacting and trafficking domain containing 1. (335 aa)
	SPAST	Spastin; Belongs to the AAA ATPase family. (611 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (441 aa)

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MITD1	SPART	ENSTGUP00000010460	ENSTGUP00000036938	Microtubule interacting and trafficking domain containing 1.	Spartin.	0.422
SPART	MITD1	ENSTGUP00000036938	ENSTGUP00000010460	Spartin.	Microtubule interacting and trafficking domain containing 1.	0.422
SPAST	VPS4A	ENSTGUP00000008762	ENSTGUP00000014855	Spastin; Belongs to the AAA ATPase family.	AAA domain-containing protein.	0.461
SPAST	VPS4B	ENSTGUP00000008762	ENSTGUP00000002118	Spastin; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.460
VPS4A	SPAST	ENSTGUP00000014855	ENSTGUP00000008762	AAA domain-containing protein.	Spastin; Belongs to the AAA ATPase family.	0.461
VPS4A	VPS4B	ENSTGUP00000014855	ENSTGUP00000002118	AAA domain-containing protein.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.902
VPS4B	SPAST	ENSTGUP00000002118	ENSTGUP00000008762	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Spastin; Belongs to the AAA ATPase family.	0.460
VPS4B	VPS4A	ENSTGUP00000002118	ENSTGUP00000014855	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	AAA domain-containing protein.	0.902