STRINGSTRING
H2BE1 H2BE1 MBD3 MBD3 POLR2E POLR2E CCNH CCNH H0YTJ1_TAEGU H0YTJ1_TAEGU H0YUA9_TAEGU H0YUA9_TAEGU DMTF1 DMTF1 TWISTNB TWISTNB H2AZ1 H2AZ1 H3F3A H3F3A RRN3 RRN3 GTF2H3 GTF2H3 POLR1E POLR1E ERCC6 ERCC6 H3F3B H3F3B GTF2H1 GTF2H1 POLR1C POLR1C LOC100224417 LOC100224417 LOC100225375 LOC100225375 LOC100231060 LOC100231060 TBP TBP POLR2H POLR2H POLR2F POLR2F POLR1A POLR1A TBPL1 TBPL1 TAF1D TAF1D TAF1B TAF1B TBPL2 TBPL2 H2AFV H2AFV GATAD2B GATAD2B AIRE AIRE POLR2K POLR2K LOC100218691 LOC100218691 ENSTGUP00000019566 ENSTGUP00000019566 RBBP4 RBBP4 LOC100221944 LOC100221944 LOC100221944-2 LOC100221944-2 MTA3 MTA3 LOC100226365 LOC100226365 UBTF UBTF LOC100221944-3 LOC100221944-3 LOC115493147 LOC115493147 TTF1 TTF1 MNAT1 MNAT1 LOC100222323 LOC100222323 LOC100218691-2 LOC100218691-2 LOC100218691-3 LOC100218691-3 LOC100221272 LOC100221272 CDK7 CDK7 ERCC2 ERCC2 LOC115493147-2 LOC115493147-2 ENSTGUP00000028021 ENSTGUP00000028021 MTA1 MTA1 ENSTGUP00000028513 ENSTGUP00000028513 LOC100217646 LOC100217646 CHD3 CHD3 GATAD2A GATAD2A ENSTGUP00000030654 ENSTGUP00000030654 LOC100218691-4 LOC100218691-4 ENSTGUP00000030980 ENSTGUP00000030980 CHD5 CHD5 MTA2 MTA2 LOC100218635 LOC100218635 CBX3 CBX3 ENSTGUP00000032892 ENSTGUP00000032892 ENSTGUP00000033446 ENSTGUP00000033446 LOC105760050 LOC105760050 TAF1A TAF1A LOC100218635-2 LOC100218635-2 CENPA CENPA LOC100217646-2 LOC100217646-2 POLR1B POLR1B RBBP7 RBBP7 LOC100218635-3 LOC100218635-3 ENSTGUP00000036179 ENSTGUP00000036179 ERCC3 ERCC3 ZNRD1 ZNRD1 CHD4 CHD4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2BE1Histone domain-containing protein; Belongs to the histone H2B family. (179 aa)
MBD3MBD domain-containing protein. (290 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
CCNHCyclin H; Belongs to the cyclin family. (306 aa)
H0YTJ1_TAEGUGeneral transcription factor IIH subunit. (523 aa)
H0YUA9_TAEGUUncharacterized protein. (482 aa)
DMTF1Cyclin D binding myb like transcription factor 1. (767 aa)
TWISTNBTWIST neighbor. (341 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (274 aa)
H3F3AHistone H3; Belongs to the histone H3 family. (136 aa)
RRN3RRN3 homolog, RNA polymerase I transcription factor. (618 aa)
GTF2H3General transcription factor IIH subunit 3. (328 aa)
POLR1ERNA polymerase I subunit E. (485 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1614 aa)
H3F3BTaeniopygia guttata H3 histone, family 3B (H3F3B), mRNA. (136 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
POLR1CRNA polymerase I and III subunit C. (346 aa)
LOC100224417Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC100225375Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC100231060Histone H2A; Belongs to the histone H2A family. (129 aa)
TBPTATA-box binding protein. (302 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
POLR2FUncharacterized protein. (127 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1707 aa)
TBPL1TATA-box binding protein like 1. (183 aa)
TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D. (357 aa)
TAF1BTATA-box binding protein associated factor, RNA polymerase I subunit B. (580 aa)
TBPL2TATA-box binding protein like 2. (320 aa)
H2AFVHistone H2A; Belongs to the histone H2A family. (128 aa)
GATAD2BGATA zinc finger domain containing 2B. (629 aa)
AIREAutoimmune regulator. (346 aa)
POLR2KPutative DNA directed RNA polymerase II polypeptide K variant 1. (91 aa)
LOC100218691Histone H2A; Belongs to the histone H2A family. (129 aa)
ENSTGUP00000019566annotation not available (51 aa)
RBBP4RB binding protein 4, chromatin remodeling factor. (425 aa)
LOC100221944Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC100221944-2Uncharacterized LOC100221944. (103 aa)
MTA3Metastasis associated 1 family member 3. (706 aa)
LOC100226365Histone H2A; Belongs to the histone H2A family. (129 aa)
UBTFUpstream binding transcription factor. (800 aa)
LOC100221944-3Uncharacterized LOC100221944. (103 aa)
LOC115493147Histone H3.3. (374 aa)
TTF1HTH myb-type domain-containing protein. (688 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (334 aa)
LOC100222323LOW QUALITY PROTEIN: histone H3-like centromeric protein A. (126 aa)
LOC100218691-2Histone H2A-IV. (129 aa)
LOC100218691-3Histone H2A-IV. (129 aa)
LOC100221272Histone H2B; Belongs to the histone H2B family. (297 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (350 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (576 aa)
LOC115493147-2Histone H3.3. (136 aa)
ENSTGUP00000028021annotation not available (273 aa)
MTA1Metastasis associated 1. (863 aa)
ENSTGUP00000028513annotation not available (581 aa)
LOC100217646Histone H3; Belongs to the histone H3 family. (136 aa)
CHD3LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 3. (316 aa)
GATAD2AGATA zinc finger domain containing 2A. (607 aa)
ENSTGUP00000030654annotation not available (62 aa)
LOC100218691-4Histone H2A-IV. (129 aa)
ENSTGUP00000030980annotation not available (74 aa)
CHD5Uncharacterized protein. (2063 aa)
MTA2Uncharacterized protein. (746 aa)
LOC100218635Histone H2B 1/2/3/4/6. (126 aa)
CBX3Chromobox 3. (199 aa)
ENSTGUP00000032892annotation not available (1625 aa)
ENSTGUP00000033446annotation not available (74 aa)
LOC105760050General transcription factor IIH subunit 1-like. (201 aa)
TAF1ATATA-box binding protein associated factor, RNA polymerase I subunit A. (466 aa)
LOC100218635-2Histone H2B 1/2/3/4/6. (126 aa)
CENPACentromere protein A. (196 aa)
LOC100217646-2Histone H3. (136 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1205 aa)
RBBP7RB binding protein 7, chromatin remodeling factor. (424 aa)
LOC100218635-3Histone H2B 1/2/3/4/6. (126 aa)
ENSTGUP00000036179annotation not available (159 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (841 aa)
ZNRD1Zinc ribbon domain containing 1. (84 aa)
CHD4Uncharacterized protein. (1924 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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