STRINGSTRING
TBPL2 TBPL2 POLR2K POLR2K UBTF UBTF TTF1 TTF1 MNAT1 MNAT1 CAVIN1 CAVIN1 CDK7 CDK7 ERCC2 ERCC2 LOC105760050 LOC105760050 TAF1A TAF1A POLR1B POLR1B ERCC3 ERCC3 ZNRD1 ZNRD1 POLR2E POLR2E CCNH CCNH H0YTJ1_TAEGU H0YTJ1_TAEGU H0YUA9_TAEGU H0YUA9_TAEGU TWISTNB TWISTNB GTF2H3 GTF2H3 POLR1E POLR1E GTF2H1 GTF2H1 POLR1C POLR1C TBP TBP POLR2H POLR2H POLR2F POLR2F POLR1A POLR1A TAF1D TAF1D TAF1B TAF1B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TBPL2TATA-box binding protein like 2. (320 aa)
POLR2KPutative DNA directed RNA polymerase II polypeptide K variant 1. (91 aa)
UBTFUpstream binding transcription factor. (800 aa)
TTF1HTH myb-type domain-containing protein. (688 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (334 aa)
CAVIN1Caveolae associated protein 1. (367 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (350 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (576 aa)
LOC105760050General transcription factor IIH subunit 1-like. (201 aa)
TAF1ATATA-box binding protein associated factor, RNA polymerase I subunit A. (466 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1205 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (841 aa)
ZNRD1Zinc ribbon domain containing 1. (84 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
CCNHCyclin H; Belongs to the cyclin family. (306 aa)
H0YTJ1_TAEGUGeneral transcription factor IIH subunit. (523 aa)
H0YUA9_TAEGUUncharacterized protein. (482 aa)
TWISTNBTWIST neighbor. (341 aa)
GTF2H3General transcription factor IIH subunit 3. (328 aa)
POLR1ERNA polymerase I subunit E. (485 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
POLR1CRNA polymerase I and III subunit C. (346 aa)
TBPTATA-box binding protein. (302 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
POLR2FUncharacterized protein. (127 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1707 aa)
TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D. (357 aa)
TAF1BTATA-box binding protein associated factor, RNA polymerase I subunit B. (580 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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