STRINGSTRING
LOC100222646 LOC100222646 SIN3B SIN3B BLVRA BLVRA H0YUE5_TAEGU H0YUE5_TAEGU NPVF NPVF LOC115492946 LOC115492946 NCOA6 NCOA6 H0YZF4_TAEGU H0YZF4_TAEGU SIN3A SIN3A LRPPRC LRPPRC LOC100221209 LOC100221209 CREBBP CREBBP HBAA HBAA TBL1X TBL1X HBAP HBAP CLCC1 CLCC1 NCOR2 NCOR2 SURF1 SURF1 SCO1 SCO1 COX7B COX7B HM13 HM13 NCOR1 NCOR1 COX7C COX7C H0Z8Y4_TAEGU H0Z8Y4_TAEGU HELZ2 HELZ2 SPPL3 SPPL3 C1orf198 C1orf198 HMOX1 HMOX1 TGS1 TGS1 CHD7 CHD7 PPARA PPARA COX6C COX6C COX7A2 COX7A2 SMARCD3 SMARCD3 LOC100221884 LOC100221884 COX5B COX5B COX16 COX16 COX18 COX18 ENSTGUP00000022487 ENSTGUP00000022487 ENSTGUP00000023479 ENSTGUP00000023479 SCO2 SCO2 DESI2 DESI2 CHD8 CHD8 LOC115491737 LOC115491737 ENSTGUP00000027766 ENSTGUP00000027766 MED1 MED1 HMOX2 HMOX2 FABP1 FABP1 CARM1 CARM1 ENSTGUP00000029122 ENSTGUP00000029122 ENSTGUP00000029264 ENSTGUP00000029264 LOC100218354 LOC100218354 RXRA RXRA ENSTGUP00000031487 ENSTGUP00000031487 HBAD HBAD CHD9 CHD9 COX7A2L COX7A2L TBL1XR1 TBL1XR1 COX11 COX11 DESI1 DESI1 LOC100222254 LOC100222254
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100222646GLOBIN domain-containing protein; Belongs to the globin family. (329 aa)
SIN3BSIN3 transcription regulator family member B. (1138 aa)
BLVRAUncharacterized protein. (296 aa)
H0YUE5_TAEGUMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (590 aa)
NPVFUncharacterized protein. (193 aa)
LOC115492946Cytochrome c oxidase subunit 6B1. (111 aa)
NCOA6Nucleic_acid_bd domain-containing protein. (2029 aa)
H0YZF4_TAEGUUncharacterized protein. (52 aa)
SIN3ASIN3 transcription regulator family member A. (1274 aa)
LRPPRCUncharacterized protein. (1369 aa)
LOC100221209Uncharacterized protein. (145 aa)
CREBBPCREB binding protein. (1929 aa)
HBAAPutative hemoglobin alpha; Belongs to the globin family. (142 aa)
TBL1XUncharacterized protein. (557 aa)
HBAPGLOBIN domain-containing protein; Belongs to the globin family. (142 aa)
CLCC1Chloride channel CLIC like 1. (521 aa)
NCOR2Nuclear receptor corepressor 2. (2480 aa)
SURF1SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (320 aa)
SCO1SCO cytochrome c oxidase assembly protein 1. (505 aa)
COX7BPutative cytochrome c oxidase subunit VIIb variant 1. (78 aa)
HM13Histocompatibility minor 13. (393 aa)
NCOR1Nuclear receptor corepressor 1. (2533 aa)
COX7CPutative cytochrome c oxidase subunit VIIc. (75 aa)
H0Z8Y4_TAEGUUncharacterized protein. (77 aa)
HELZ2Helicase with zinc finger 2. (2820 aa)
SPPL3Signal peptide peptidase like 3. (384 aa)
C1orf198Chromosome 1 open reading frame 198. (336 aa)
HMOX1Heme oxygenase 1. (330 aa)
TGS1Trimethylguanosine synthase 1. (882 aa)
CHD7Chromodomain helicase DNA binding protein 7. (3012 aa)
PPARAPeroxisome proliferator activated receptor alpha. (468 aa)
COX6CPutative cytochrome c oxidase subunit VIc. (107 aa)
COX7A2Putative cytochrome c oxidase subunit VIIa 2. (83 aa)
SMARCD3SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D. (485 aa)
LOC100221884DUF862 domain-containing protein. (196 aa)
COX5BCytochrome c oxidase subunit 5B, mitochondrial. (126 aa)
COX16Cytochrome c oxidase assembly factor COX16. (164 aa)
COX18Uncharacterized protein. (339 aa)
ENSTGUP00000022487Translational activator of cytochrome c oxidase 1. (536 aa)
ENSTGUP00000023479annotation not available (146 aa)
SCO2SCO cytochrome c oxidase assembly protein 2. (293 aa)
DESI2Cytochrome c oxidase assembly factor COX20. (471 aa)
CHD8Chromodomain helicase DNA binding protein 8. (1744 aa)
LOC115491737Histone-arginine methyltransferase CARM1. (850 aa)
ENSTGUP00000027766annotation not available (171 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1581 aa)
HMOX2Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. (311 aa)
FABP1FABP domain-containing protein. (184 aa)
CARM1LOW QUALITY PROTEIN: histone-arginine methyltransferase CARM1. (581 aa)
ENSTGUP00000029122annotation not available (306 aa)
ENSTGUP00000029264annotation not available (244 aa)
LOC100218354Taeniopygia guttata cytochrome c oxidase subunit 5A, mitochondrial-like (LOC100218354), mRNA. (162 aa)
RXRARetinoid X receptor alpha. (503 aa)
ENSTGUP00000031487annotation not available (150 aa)
HBADGLOBIN domain-containing protein; Belongs to the globin family. (174 aa)
CHD9Chromodomain helicase DNA binding protein 9. (2890 aa)
COX7A2LCytochrome c oxidase subunit 7A2 like. (116 aa)
TBL1XR1Transducin beta like 1 X-linked receptor 1. (506 aa)
COX11Uncharacterized protein. (331 aa)
DESI1Desumoylating isopeptidase 1. (230 aa)
LOC100222254Cytochrome c oxidase subunit 4I1. (464 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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