(13 nodes) Ephrin receptor ligand binding domain network (Taeniopygia guttata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	YRDC	Uncharacterized protein. (1004 aa)
	EPHB1	EPH receptor B1. (1003 aa)
	EPHA4	EPH receptor A4. (1011 aa)
	EPHA2	EPH receptor A2; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1004 aa)
	EPHB3	Receptor protein-tyrosine kinase. (991 aa)
	EPHA7	EPH receptor A7. (1020 aa)
	EPHA1	EPH receptor A1. (962 aa)
	EPHA3	EPH receptor A3. (937 aa)
	EPHA6	EPH receptor A6. (965 aa)
	EPHA8	EPH receptor A8. (984 aa)
	EPHB6	EPH receptor B6. (1000 aa)
	EPHA5	EPH receptor A5. (1020 aa)
	EPHB2	EPH receptor B2. (995 aa)

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EPHA1	EPHA2	ENSTGUP00000013638	ENSTGUP00000002121	EPH receptor A1.	EPH receptor A2; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.752
EPHA1	EPHB1	ENSTGUP00000013638	ENSTGUP00000007088	EPH receptor A1.	EPH receptor B1.	0.403
EPHA1	EPHB2	ENSTGUP00000013638	ENSTGUP00000037069	EPH receptor A1.	EPH receptor B2.	0.423
EPHA1	EPHB6	ENSTGUP00000013638	ENSTGUP00000031447	EPH receptor A1.	EPH receptor B6.	0.400
EPHA2	EPHA1	ENSTGUP00000002121	ENSTGUP00000013638	EPH receptor A2; Belongs to the protein kinase superfamily. Tyr protein kinase family.	EPH receptor A1.	0.752
EPHB1	EPHA1	ENSTGUP00000007088	ENSTGUP00000013638	EPH receptor B1.	EPH receptor A1.	0.403
EPHB2	EPHA1	ENSTGUP00000037069	ENSTGUP00000013638	EPH receptor B2.	EPH receptor A1.	0.423
EPHB6	EPHA1	ENSTGUP00000031447	ENSTGUP00000013638	EPH receptor B6.	EPH receptor A1.	0.400