STRINGSTRING
SIO02405.1 SIO02405.1 SIO02433.1 SIO02433.1 SIO02448.1 SIO02448.1 SIO02460.1 SIO02460.1 SIO02477.1 SIO02477.1 SIO02491.1 SIO02491.1 SIO02506.1 SIO02506.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SIO02405.1Bacteroides conjugative transposon TraM protein. (439 aa)
SIO02433.1Bacteroides conjugative transposon TraK protein. (207 aa)
SIO02448.1Bacteroides conjugative transposon TraJ protein. (330 aa)
SIO02460.1Protein of unknown function. (210 aa)
SIO02477.1Bacteroides conjugation system ATPase, TraG family. (834 aa)
SIO02491.1Protein of unknown function. (109 aa)
SIO02506.1Protein of unknown function. (101 aa)
Your Current Organism:
Chryseobacterium scophthalmum
NCBI taxonomy Id: 59733
Other names: ATCC 700039, C. scophthalmum, CCM 4109, CCUG 33454, CIP 104199, DSM 16779, Flavobacterium scophthalmum, LMG 13028, LMG:13028
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