(11 nodes) TBP-class protein binding network (Agaricus bisporus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K5XX86_AGABU	TFIIB-type domain-containing protein. (349 aa)
	K5XQB0_AGABU	TIP120 domain-containing protein. (1219 aa)
	K5XL90_AGABU	DUF3591 domain-containing protein. (664 aa)
	K5XHU1_AGABU	Uncharacterized protein. (475 aa)
	K5XA16_AGABU	TFIID_20kDa domain-containing protein. (350 aa)
	K5X9Q9_AGABU	Uncharacterized protein. (54 aa)
	K5X8D2_AGABU	Uncharacterized protein. (394 aa)
	K5X4K7_AGABU	Uncharacterized protein. (1915 aa)
	K5VR27_AGABU	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (114 aa)
	K5WHW4_AGABU	TFIIB-type domain-containing protein. (662 aa)
	K5W737_AGABU	WD_REPEATS_REGION domain-containing protein. (684 aa)

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5VR27_AGABU	K5X8D2_AGABU	K5VR27	K5X8D2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	Uncharacterized protein.	0.814
K5VR27_AGABU	K5X9Q9_AGABU	K5VR27	K5X9Q9	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	Uncharacterized protein.	0.937
K5VR27_AGABU	K5XA16_AGABU	K5VR27	K5XA16	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	TFIID_20kDa domain-containing protein.	0.879
K5VR27_AGABU	K5XL90_AGABU	K5VR27	K5XL90	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	DUF3591 domain-containing protein.	0.814
K5VR27_AGABU	K5XX86_AGABU	K5VR27	K5XX86	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	TFIIB-type domain-containing protein.	0.937
K5W737_AGABU	K5XA16_AGABU	K5W737	K5XA16	WD_REPEATS_REGION domain-containing protein.	TFIID_20kDa domain-containing protein.	0.863
K5X4K7_AGABU	K5X9Q9_AGABU	K5X4K7	K5X9Q9	Uncharacterized protein.	Uncharacterized protein.	0.435
K5X4K7_AGABU	K5XA16_AGABU	K5X4K7	K5XA16	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.499
K5X4K7_AGABU	K5XX86_AGABU	K5X4K7	K5XX86	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.435
K5X8D2_AGABU	K5VR27_AGABU	K5X8D2	K5VR27	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.814
K5X8D2_AGABU	K5X9Q9_AGABU	K5X8D2	K5X9Q9	Uncharacterized protein.	Uncharacterized protein.	0.807
K5X8D2_AGABU	K5XA16_AGABU	K5X8D2	K5XA16	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.964
K5X8D2_AGABU	K5XL90_AGABU	K5X8D2	K5XL90	Uncharacterized protein.	DUF3591 domain-containing protein.	0.994
K5X8D2_AGABU	K5XX86_AGABU	K5X8D2	K5XX86	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.807
K5X9Q9_AGABU	K5VR27_AGABU	K5X9Q9	K5VR27	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.937
K5X9Q9_AGABU	K5X4K7_AGABU	K5X9Q9	K5X4K7	Uncharacterized protein.	Uncharacterized protein.	0.435
K5X9Q9_AGABU	K5X8D2_AGABU	K5X9Q9	K5X8D2	Uncharacterized protein.	Uncharacterized protein.	0.807
K5X9Q9_AGABU	K5XA16_AGABU	K5X9Q9	K5XA16	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.848
K5X9Q9_AGABU	K5XL90_AGABU	K5X9Q9	K5XL90	Uncharacterized protein.	DUF3591 domain-containing protein.	0.807
K5XA16_AGABU	K5VR27_AGABU	K5XA16	K5VR27	TFIID_20kDa domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.879