(13 nodes) Guanine nucleotide binding protein (G-protein), alpha subunit network (Agaricus bisporus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K5XLG8_AGABU	Uncharacterized protein. (538 aa)
	K5XPJ6_AGABU	Uncharacterized protein. (491 aa)
	K5XUN6_AGABU	Uncharacterized protein. (517 aa)
	K5WWT3_AGABU	Uncharacterized protein. (414 aa)
	K5WWW4_AGABU	Uncharacterized protein. (354 aa)
	K5WYV6_AGABU	Uncharacterized protein. (356 aa)
	K5X004_AGABU	Uncharacterized protein. (392 aa)
	K5WWB2_AGABU	Uncharacterized protein. (458 aa)
	K5VRM2_AGABU	Uncharacterized protein. (362 aa)
	K5X038_AGABU	Uncharacterized protein. (596 aa)
	K5XBU8_AGABU	Uncharacterized protein. (486 aa)
	K5XDS6_AGABU	Uncharacterized protein. (350 aa)
	K5XK28_AGABU	Uncharacterized protein. (356 aa)

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5WWW4_AGABU	K5XDS6_AGABU	K5WWW4	K5XDS6	Uncharacterized protein.	Uncharacterized protein.	0.438
K5WYV6_AGABU	K5XDS6_AGABU	K5WYV6	K5XDS6	Uncharacterized protein.	Uncharacterized protein.	0.478
K5XBU8_AGABU	K5XPJ6_AGABU	K5XBU8	K5XPJ6	Uncharacterized protein.	Uncharacterized protein.	0.905
K5XBU8_AGABU	K5XUN6_AGABU	K5XBU8	K5XUN6	Uncharacterized protein.	Uncharacterized protein.	0.908
K5XDS6_AGABU	K5WWW4_AGABU	K5XDS6	K5WWW4	Uncharacterized protein.	Uncharacterized protein.	0.438
K5XDS6_AGABU	K5WYV6_AGABU	K5XDS6	K5WYV6	Uncharacterized protein.	Uncharacterized protein.	0.478
K5XPJ6_AGABU	K5XBU8_AGABU	K5XPJ6	K5XBU8	Uncharacterized protein.	Uncharacterized protein.	0.905
K5XPJ6_AGABU	K5XUN6_AGABU	K5XPJ6	K5XUN6	Uncharacterized protein.	Uncharacterized protein.	0.907
K5XUN6_AGABU	K5XBU8_AGABU	K5XUN6	K5XBU8	Uncharacterized protein.	Uncharacterized protein.	0.908
K5XUN6_AGABU	K5XPJ6_AGABU	K5XUN6	K5XPJ6	Uncharacterized protein.	Uncharacterized protein.	0.907