(10 nodes) Thiolase-like network (Agaricus bisporus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K5X0Y3_AGABU	Uncharacterized protein. (2672 aa)
	K5XYC4_AGABU	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (411 aa)
	K5XKL6_AGABU	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (412 aa)
	K5XJ55_AGABU	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (459 aa)
	K5XG90_AGABU	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (407 aa)
	K5X1U0_AGABU	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (467 aa)
	K5WXW0_AGABU	Uncharacterized protein. (1913 aa)
	K5WLG5_AGABU	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (127 aa)
	K5WAD7_AGABU	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (673 aa)
	K5VUH0_AGABU	Carrier domain-containing protein. (3931 aa)

Your Current Organism:

Agaricus bisporus

NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5WAD7_AGABU	K5X1U0_AGABU	K5WAD7	K5X1U0	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.911
K5WAD7_AGABU	K5XG90_AGABU	K5WAD7	K5XG90	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.904
K5WAD7_AGABU	K5XJ55_AGABU	K5WAD7	K5XJ55	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.900
K5WAD7_AGABU	K5XKL6_AGABU	K5WAD7	K5XKL6	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.903
K5WAD7_AGABU	K5XYC4_AGABU	K5WAD7	K5XYC4	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.913
K5WLG5_AGABU	K5X1U0_AGABU	K5WLG5	K5X1U0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.917
K5WLG5_AGABU	K5XJ55_AGABU	K5WLG5	K5XJ55	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.774
K5WLG5_AGABU	K5XYC4_AGABU	K5WLG5	K5XYC4	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.513
K5X1U0_AGABU	K5WAD7_AGABU	K5X1U0	K5WAD7	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.911
K5X1U0_AGABU	K5WLG5_AGABU	K5X1U0	K5WLG5	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.917
K5X1U0_AGABU	K5XG90_AGABU	K5X1U0	K5XG90	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.991
K5X1U0_AGABU	K5XKL6_AGABU	K5X1U0	K5XKL6	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.991
K5X1U0_AGABU	K5XYC4_AGABU	K5X1U0	K5XYC4	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.997
K5XG90_AGABU	K5WAD7_AGABU	K5XG90	K5WAD7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.904
K5XG90_AGABU	K5X1U0_AGABU	K5XG90	K5X1U0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.991
K5XG90_AGABU	K5XJ55_AGABU	K5XG90	K5XJ55	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.976
K5XG90_AGABU	K5XKL6_AGABU	K5XG90	K5XKL6	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.902
K5XG90_AGABU	K5XYC4_AGABU	K5XG90	K5XYC4	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.917
K5XJ55_AGABU	K5WAD7_AGABU	K5XJ55	K5WAD7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.900
K5XJ55_AGABU	K5WLG5_AGABU	K5XJ55	K5WLG5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.774