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WH47_01203 WH47_01203 WH47_01204 WH47_01204 WH47_01205 WH47_01205 WH47_12666 WH47_12666 WH47_11466 WH47_11466 WH47_11513 WH47_11513 WH47_12448 WH47_12448 WH47_09701 WH47_09701 WH47_09720 WH47_09720 WH47_09722 WH47_09722 WH47_09755 WH47_09755 WH47_09140 WH47_09140 WH47_08112 WH47_08112 WH47_08113 WH47_08113 WH47_07767 WH47_07767 WH47_07804 WH47_07804 WH47_09015 WH47_09015 WH47_07458 WH47_07458 WH47_08444 WH47_08444 WH47_07720 WH47_07720 WH47_05610 WH47_05610 WH47_05633 WH47_05633 WH47_07152 WH47_07152 WH47_05634 WH47_05634 WH47_04329 WH47_04329 WH47_06097 WH47_06097 WH47_06101 WH47_06101 WH47_06715 WH47_06715 WH47_02955 WH47_02955 WH47_06196 WH47_06196 WH47_03965 WH47_03965 WH47_01808 WH47_01808 WH47_03981 WH47_03981 WH47_03972 WH47_03972 WH47_03809 WH47_03809 WH47_04230 WH47_04230 WH47_04181 WH47_04181 WH47_04257 WH47_04257 WH47_04837 WH47_04837 WH47_04820 WH47_04820 WH47_02511 WH47_02511 WH47_03113 WH47_03113 WH47_04438 WH47_04438 WH47_03882 WH47_03882 WH47_02468 WH47_02468 WH47_02657 WH47_02657 WH47_02702 WH47_02702 WH47_02694 WH47_02694 WH47_02699 WH47_02699 WH47_02758 WH47_02758 WH47_01165 WH47_01165 WH47_02221 WH47_02221 WH47_02208 WH47_02208 WH47_12512 WH47_12512 WH47_01604 WH47_01604 WH47_12006 WH47_12006 WH47_00222 WH47_00222 WH47_04544 WH47_04544 WH47_04680 WH47_04680 WH47_09797 WH47_09797 WH47_09808 WH47_09808 WH47_01346 WH47_01346 WH47_09951 WH47_09951 WH47_09981 WH47_09981 WH47_10016 WH47_10016 WH47_10033 WH47_10033 WH47_09960 WH47_09960 WH47_10059 WH47_10059 WH47_10025 WH47_10025 WH47_00561 WH47_00561 WH47_10254 WH47_10254 WH47_10241 WH47_10241 WH47_12717 WH47_12717 WH47_10303 WH47_10303 WH47_12762 WH47_12762 WH47_00993 WH47_00993 WH47_00995 WH47_00995 WH47_01027 WH47_01027 WH47_07300 WH47_07300 WH47_08929 WH47_08929 WH47_00448 WH47_00448 WH47_12392 WH47_12392 WH47_12421 WH47_12421 WH47_12415 WH47_12415 WH47_11760 WH47_11760 WH47_11776 WH47_11776 WH47_11694 WH47_11694 WH47_11844 WH47_11844 WH47_11830 WH47_11830 WH47_00114 WH47_00114 WH47_00143 WH47_00143 WH47_09258 WH47_09258 WH47_11595 WH47_11595 WH47_11403 WH47_11403 WH47_11397 WH47_11397 WH47_11128 WH47_11128 WH47_11399 WH47_11399 WH47_12190 WH47_12190 WH47_03248 WH47_03248 WH47_03339 WH47_03339 WH47_10667 WH47_10667 WH47_03532 WH47_03532 WH47_06364 WH47_06364 WH47_10789 WH47_10789 WH47_09488 WH47_09488 WH47_09365 WH47_09365 WH47_09430 WH47_09430 WH47_09351 WH47_09351 WH47_05466 WH47_05466 WH47_07909 WH47_07909 WH47_05504 WH47_05504 WH47_10434 WH47_10434 WH47_09105 WH47_09105 WH47_08204 WH47_08204 WH47_08319 WH47_08319 WH47_08349 WH47_08349 WH47_08530 WH47_08530 WH47_08535 WH47_08535 WH47_08565 WH47_08565 WH47_03603 WH47_03603 WH47_03571 WH47_03571 WH47_06732 WH47_06732 WH47_06757 WH47_06757 WH47_03604 WH47_03604 WH47_03690 WH47_03690 WH47_06793 WH47_06793 WH47_06731 WH47_06731 WH47_02174 WH47_02174 WH47_02376 WH47_02376 WH47_02379 WH47_02379
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WH47_01203Transcription initiation factor TFIID subunit 3. (78 aa)
WH47_01204Uncharacterized protein. (164 aa)
WH47_01205Transcription initiation factor TFIID subunit 3. (742 aa)
WH47_12666DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1440 aa)
WH47_11466General transcription factor IIH subunit 1. (562 aa)
WH47_11513Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (82 aa)
WH47_12448RNA polymerase-associated protein Rtf1. (694 aa)
WH47_09701DUF2236 domain-containing protein. (321 aa)
WH47_09720DNA-directed RNA polymerases I, II, and III subunit RPABC3. (131 aa)
WH47_09722DNA-directed RNA polymerases I, II, and III subunit RPABC3. (160 aa)
WH47_09755General transcription factor 3C polypeptide 3. (885 aa)
WH47_09140Transcription initiation factor TFIID subunit 11. (240 aa)
WH47_08112Transcription initiation factor TFIID subunit 1. (1697 aa)
WH47_08113Transcription initiation factor TFIID subunit 1. (176 aa)
WH47_07767Putative ATP-dependent RNA helicase DDX11. (731 aa)
WH47_07804Transcription elongation factor S-II. (289 aa)
WH47_09015Uncharacterized protein. (154 aa)
WH47_07458Uncharacterized protein. (222 aa)
WH47_08444Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (422 aa)
WH47_07720DNA-directed RNA polymerases I, II, and III subunit RPABC4. (57 aa)
WH47_05610S1 RNA-binding domain-containing protein 1. (878 aa)
WH47_05633DNA-directed RNA polymerase II subunit RPB1. (713 aa)
WH47_07152Transcription initiation factor TFIID subunit 8. (291 aa)
WH47_05634DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
WH47_04329CCDC66 domain-containing protein. (808 aa)
WH47_06097Chromodomain-helicase-DNA-binding protein 1. (1812 aa)
WH47_06101TFIIH basal transcription factor complex helicase XPD subunit. (761 aa)
WH47_06715Uncharacterized protein. (650 aa)
WH47_02955General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (272 aa)
WH47_06196Transcription factor IIIA. (368 aa)
WH47_03965Ell-associated factor Eaf. (335 aa)
WH47_01808Immunoglobulin G-binding protein A. (98 aa)
WH47_03981Transcription initiation factor TFIID subunit 5. (640 aa)
WH47_03972DNA excision repair protein haywire. (794 aa)
WH47_03809TATA-box-binding protein. (241 aa)
WH47_04230Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1719 aa)
WH47_04181Transcription initiation factor TFIID subunit 6. (638 aa)
WH47_04257TOX high mobility group box family member 2. (668 aa)
WH47_04837Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1709 aa)
WH47_04820mRNA cap guanine-N7 methyltransferase. (376 aa)
WH47_02511RNA polymerase I-specific transcription initiation factor RRN3. (452 aa)
WH47_03113Transcription elongation factor B polypeptide 3. (669 aa)
WH47_04438Putative tyrosine-protein phosphatase F54C8.4. (381 aa)
WH47_03882SID1 transmembrane family member 1. (770 aa)
WH47_02468DNA-directed RNA polymerase I subunit RPA43. (728 aa)
WH47_02657DNA-directed RNA polymerase III subunit RPC8. (203 aa)
WH47_02702FACT complex subunit spt16. (1101 aa)
WH47_02694CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (320 aa)
WH47_02699Transcription initiation factor IIB. (315 aa)
WH47_02758General transcription factor IIH subunit. (400 aa)
WH47_01165Transcription initiation factor TFIID subunit 2. (1187 aa)
WH47_02221Transcription initiation factor TFIID subunit 4. (912 aa)
WH47_02208Putative RNA polymerase II subunit B1 CTD phosphatase rpap2. (255 aa)
WH47_12512Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (82 aa)
WH47_01604Putative DNA-directed RNA polymerases I and III subunit RPAC2. (87 aa)
WH47_12006S-antigen protein. (1076 aa)
WH47_00222DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (311 aa)
WH47_04544RNA polymerase-associated protein CTR9 like protein. (1186 aa)
WH47_04680Transcription elongation factor SPT5. (1135 aa)
WH47_09797DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (155 aa)
WH47_09808General transcription factor IIH subunit 3. (247 aa)
WH47_01346Transcription initiation factor TFIID subunit 12. (202 aa)
WH47_09951DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1028 aa)
WH47_09981Transcription factor TFIIIB component B'' like protein. (676 aa)
WH47_10016General transcription factor IIH subunit 5. (67 aa)
WH47_10033Transcription initiation factor TFIID subunit 9. (267 aa)
WH47_09960TATA box-binding protein-like protein 1. (291 aa)
WH47_10059Cyclin-dependent kinase 2-interacting protein. (160 aa)
WH47_10025Cyclin-dependent kinase 20. (331 aa)
WH47_00561Cyclin-H; Belongs to the cyclin family. (455 aa)
WH47_10254Aggrecan core protein. (102 aa)
WH47_10241DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1135 aa)
WH47_12717General transcription factor 3C polypeptide 6. (404 aa)
WH47_10303General transcription factor 3C polypeptide 5. (617 aa)
WH47_12762DNA-directed RNA polymerase II subunit RPB7. (179 aa)
WH47_00993Transcription initiation factor TFIID subunit 6. (518 aa)
WH47_00995Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (593 aa)
WH47_01027Repressor of RNA polymerase III transcription MAF1; Element of the TORC1 signaling pathway that acts as a mediator of diverse signals and that represses RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (234 aa)
WH47_07300RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (496 aa)
WH47_08929Protein ENL. (661 aa)
WH47_00448TATA-box-binding protein. (313 aa)
WH47_12392RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (750 aa)
WH47_12421Another transcription unit protein. (586 aa)
WH47_12415TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L. (592 aa)
WH47_11760Protein Shroom2. (1989 aa)
WH47_11776DNA-directed RNA polymerase III subunit RPC9. (98 aa)
WH47_11694DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
WH47_11844Transcription initiation factor TFIID subunit 7. (410 aa)
WH47_11830Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (116 aa)
WH47_00114Uncharacterized protein. (687 aa)
WH47_00143DNA-directed RNA polymerases I, II, and III subunit RPABC2. (130 aa)
WH47_09258General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (446 aa)
WH47_11595Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (294 aa)
WH47_11403DNA-directed RNA polymerases I and III subunit RPAC1. (511 aa)
WH47_11397Transcription factor IIIB 90 kDa subunit. (362 aa)
WH47_11128Transcription initiation factor TFIID subunit 10. (127 aa)
WH47_11399Transcription factor IIIB 90 kDa subunit. (190 aa)
WH47_12190Uncharacterized protein. (667 aa)
WH47_03248Protein IWS1 like protein. (742 aa)
WH47_03339DNA-directed RNA polymerase III subunit RPC7-like. (216 aa)
WH47_10667DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
WH47_03532DUF2236 domain-containing protein. (340 aa)
WH47_06364snRNA-activating protein complex subunit 1. (301 aa)
WH47_10789DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
WH47_09488snRNA-activating protein complex subunit 4. (855 aa)
WH47_09365Uncharacterized protein. (1274 aa)
WH47_09430DNA-directed RNA polymerase III subunit RPC5. (504 aa)
WH47_09351DNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
WH47_05466Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (338 aa)
WH47_07909DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1704 aa)
WH47_05504RNA polymerase II elongation factor ELL. (584 aa)
WH47_10434Transcription initiation factor TFIID subunit 13. (119 aa)
WH47_09105Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (104 aa)
WH47_08204General transcription factor 3C polypeptide 2. (1262 aa)
WH47_08319POU domain protein. (517 aa)
WH47_08349RNA polymerase II-associated factor 1 like protein. (541 aa)
WH47_08530Uncharacterized protein. (160 aa)
WH47_08535FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (638 aa)
WH47_08565Transcription initiation factor IIA subunit 1. (347 aa)
WH47_03603snRNA-activating protein complex subunit 3. (124 aa)
WH47_03571DNA-directed RNA polymerase II subunit RPB3. (276 aa)
WH47_06732Uncharacterized protein. (145 aa)
WH47_06757General transcription factor IIE subunit 1. (419 aa)
WH47_03604Uncharacterized protein. (166 aa)
WH47_03690General transcription factor 3C polypeptide 1. (1943 aa)
WH47_06793DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
WH47_06731DNA-directed RNA polymerase III subunit RPC4. (145 aa)
WH47_02174DNA-directed RNA polymerase II subunit RPB11. (117 aa)
WH47_02376High mobility group protein DSP1. (308 aa)
WH47_02379High mobility group protein DSP1. (202 aa)
Your Current Organism:
Habropoda laboriosa
NCBI taxonomy Id: 597456
Other names: H. laboriosa
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