160 items (Habropoda laboriosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WH47_12651	WD repeat-containing protein 3. (938 aa)
	WH47_11445	Putative ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family. (452 aa)
	WH47_11518	Polynucleotide 5'-hydroxyl-kinase NOL9. (771 aa)
	WH47_12450	Nucleolar protein 6. (1169 aa)
	WH47_11028	H/ACA ribonucleoprotein complex subunit 4. (585 aa)
	WH47_09035	WD repeat-containing protein 36. (888 aa)
	WH47_11340	Putative methyltransferase NSUN4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (500 aa)
	WH47_11360	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (423 aa)
	WH47_09723	Ribosomal RNA processing protein 36 like protein. (231 aa)
	WH47_09702	PIH1 domain-containing protein 2. (660 aa)
	WH47_10472	Putative ribosome production factor 1. (339 aa)
	WH47_09155	Serum response factor-binding protein 1. (438 aa)
	WH47_09184	Protein KRI1 like protein. (783 aa)
	WH47_08679	Ribosome biogenesis protein bms1. (1117 aa)
	WH47_07465	Putative ATP-dependent RNA helicase Dbp73D. (622 aa)
	WH47_07853	Ribosomal RNA small subunit methyltransferase NEP1. (236 aa)
	WH47_05646	Putative ribosome-binding factor A, mitochondrial. (300 aa)
	WH47_05703	Ribosomal biogenesis protein LAS1L. (646 aa)
	WH47_07182	Zinc finger CCHC domain-containing protein 4. (504 aa)
	WH47_05669	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (206 aa)
	WH47_07146	U3 small nucleolar ribonucleoprotein IMP3. (151 aa)
	WH47_04408	Ribosome biogenesis protein NSA2 like protein. (259 aa)
	WH47_04332	RNA-binding protein 40. (346 aa)
	WH47_06632	MKI67 FHA domain-interacting nucleolar phosphoprotein-like. (267 aa)
	WH47_06100	rRNA 2'-O-methyltransferase fibrillarin. (331 aa)
	WH47_06031	Uncharacterized protein. (788 aa)
	WH47_05764	Protein RRP5 like protein. (1398 aa)
	WH47_05075	Putative ATP-dependent RNA helicase DDX52; Belongs to the DEAD box helicase family. (566 aa)
	WH47_02997	Cirhin. (694 aa)
	WH47_03040	Ribonuclease P protein subunit p40. (108 aa)
	WH47_03042	Ribonuclease P protein subunit p40. (150 aa)
	WH47_03038	UPF0184 protein C9orf16 like protein. (92 aa)
	WH47_03975	ERI1 exoribonuclease 3. (229 aa)
	WH47_05324	Putative ribosomal RNA methyltransferase CG11447. (251 aa)
	WH47_04875	RNA pseudouridylate synthase domain-containing protein 2. (521 aa)
	WH47_04823	Neuroguidin-A. (290 aa)
	WH47_02601	Putative RNA-binding protein. (360 aa)
	WH47_02425	MKI67 FHA domain-interacting nucleolar phosphoprotein-like. (236 aa)
	WH47_03858	Ribosome biogenesis protein BRX1 like protein. (315 aa)
	WH47_02658	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (337 aa)
	WH47_04724	Digestive organ expansion factor like protein. (758 aa)
	WH47_02755	Cell growth-regulating nucleolar protein. (327 aa)
	WH47_01923	Small subunit processome component 20 like protein. (2422 aa)
	WH47_01947	U3 small nucleolar RNA-associated protein 6 like protein. (601 aa)
	WH47_03163	PIH1 domain-containing protein 1. (314 aa)
	WH47_02928	Ribosome biogenesis protein BOP1 like protein. (815 aa)
	WH47_02268	Ribosomal RNA-processing protein 7 like protein A. (242 aa)
	WH47_01274	Nuclear nucleic acid-binding protein C1D. (127 aa)
	WH47_01241	Proline-, glutamic acid-and leucine-rich protein 1. (799 aa)
	WH47_01271	U3 small nucleolar RNA-associated protein 14 like protein A. (832 aa)
	WH47_02057	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (774 aa)
	WH47_12471	RNA helicase. (733 aa)
	WH47_12528	Periodic tryptophan protein 1 like protein. (496 aa)
	WH47_01471	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (441 aa)
	WH47_01546	Putative ATP-dependent RNA helicase kurz. (1166 aa)
	WH47_01081	Putative RNA exonuclease NEF-sp. (689 aa)
	WH47_12061	Putative ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. (445 aa)
	WH47_12071	Zinc finger HIT domain-containing protein 3. (134 aa)
	WH47_00172	RNA-binding protein 34. (457 aa)
	WH47_00196	RRP15-like protein. (237 aa)
	WH47_00243	Dimethyladenosine transferase 2, mitochondrial. (277 aa)
	WH47_00255	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (155 aa)
	WH47_04487	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (253 aa)
	WH47_04610	DEAD-box ATP-dependent RNA helicase 28; Belongs to the DEAD box helicase family. (656 aa)
	WH47_04672	Nucleolar protein 14 like protein. (735 aa)
	WH47_02002	Ribosomal L1 domain-containing protein. (480 aa)
	WH47_01317	HEAT repeat-containing protein 1. (2033 aa)
	WH47_01328	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (847 aa)
	WH47_09866	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (638 aa)
	WH47_09886	WD repeat-containing protein 18. (429 aa)
	WH47_10019	Bystin. (434 aa)
	WH47_09978	Nucleolar protein 58. (586 aa)
	WH47_01645	Uncharacterized protein. (85 aa)
	WH47_10147	Ribonucleases P/MRP protein subunit POP1. (832 aa)
	WH47_10185	39S ribosomal protein L1, mitochondrial. (321 aa)
	WH47_10264	Peptidyl-prolyl cis-trans isomerase. (127 aa)
	WH47_10273	39S ribosomal protein L44, mitochondrial. (297 aa)
	WH47_10316	Uncharacterized protein C12orf26. (365 aa)
	WH47_12687	Putative methyltransferase WBSCR22. (276 aa)
	WH47_12764	Exosome complex component RRP4. (294 aa)
	WH47_12784	Box C/D snoRNA protein 1. (245 aa)
	WH47_12843	WD repeat-containing protein 46. (521 aa)
	WH47_00981	Serine/threonine-protein kinase RIO3. (214 aa)
	WH47_01401	RNA helicase. (504 aa)
	WH47_12850	Ribonuclease 3. (1309 aa)
	WH47_07321	Periodic tryptophan protein 2 like protein. (869 aa)
	WH47_07235	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (924 aa)
	WH47_08861	Uncharacterized protein. (558 aa)
	WH47_00939	Methyltransferase-like protein 5. (211 aa)
	WH47_12367	Protein RRNAD1. (495 aa)
	WH47_12384	H/ACA ribonucleoprotein complex subunit 3. (64 aa)
	WH47_12401	30S ribosomal protein S11, chloroplastic. (212 aa)
	WH47_11813	U4/U6.U5 tri-snRNP-associated protein 1. (735 aa)
	WH47_10962	U3 small nucleolar RNA-interacting protein 2. (455 aa)
	WH47_10976	Uncharacterized protein. (147 aa)
	WH47_11381	Nucleolar pre-ribosomal-associated protein 1. (520 aa)
	WH47_11382	Nucleolar pre-ribosomal-associated protein 1. (269 aa)
	WH47_11101	U3 small nucleolar ribonucleoprotein IMP4. (295 aa)
	WH47_11133	Pre-rRNA-processing protein TSR1 like protein. (792 aa)
	WH47_11134	Putative ribosomal RNA methyltransferase NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (593 aa)
	WH47_12237	60S ribosomal protein L35. (123 aa)
	WH47_12288	Probable ribosome biogenesis protein WH47_12288; Probable pre-rRNA processing protein involved in ribosome biogenesis. (264 aa)
	EIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (266 aa)
	WH47_03330	rRNA-processing protein FCF1 like protein. (192 aa)
	WH47_03360	Uncharacterized protein. (137 aa)
	WH47_03387	RNA pseudouridylate synthase domain-containing protein 4. (347 aa)
	WH47_03363	RNA exonuclease 4. (256 aa)
	WH47_03490	Exosome complex component RRP43. (275 aa)
	WH47_03477	Superkiller viralicidic activity 2-like 2. (1020 aa)
	WH47_03565	U6 snRNA-associated Sm-like protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (79 aa)
	WH47_03538	rRNA-processing protein UTP23 like protein. (146 aa)
	WH47_06315	Leucine-rich repeat and WD repeat-containing protein KIAA1239. (1739 aa)
	WH47_06359	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (257 aa)
	WH47_10810	Exosome component 10. (1199 aa)
	WH47_06542	U3 small nucleolar RNA-associated protein 18 like protein. (492 aa)
	WH47_10817	Something about silencing protein 10. (453 aa)
	WH47_10831	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences. (155 aa)
	WH47_10874	Suppressor of SWI4 1 like protein. (592 aa)
	WH47_09557	Uncharacterized protein. (500 aa)
	WH47_11012	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (346 aa)
	WH47_09543	Pumilio domain-containing protein C14orf21. (603 aa)
	WH47_09558	Protein LTV1 like protein. (476 aa)
	WH47_05945	Protein MAK16 like protein A. (494 aa)
	WH47_05955	Ribonuclease P protein subunit p29. (210 aa)
	WH47_07611	WD repeat-containing protein 43. (621 aa)
	WH47_07651	Midasin. (3054 aa)
	WH47_07647	Midasin. (2055 aa)
	WH47_05965	Uncharacterized protein F58A4.6. (141 aa)
	WH47_09376	Testis-expressed sequence 10 protein like protein. (468 aa)
	WH47_09398	DUF4781 domain-containing protein. (613 aa)
	WH47_09377	Uncharacterized protein. (96 aa)
	WH47_07513	U3 small nucleolar RNA-associated protein 15 like protein. (521 aa)
	WH47_07863	60S ribosomal protein L7a. (263 aa)
	WH47_08203	60S ribosomal protein L7. (254 aa)
	WH47_08164	DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (3670 aa)
	WH47_08174	Putative RNA 3'-terminal phosphate cyclase-like protein. (374 aa)
	WH47_08284	Proliferation-associated protein 2G4. (378 aa)
	WH47_08321	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (339 aa)
	WH47_08586	Ribosome production factor 2 like protein. (291 aa)
	WH47_03593	ESF1 like protein. (692 aa)
	WH47_00593	Transducin beta-like protein 3. (789 aa)
	WH47_03685	M-phase phosphoprotein 6. (149 aa)
	WH47_06728	Uncharacterized protein. (738 aa)
	WH47_06774	RNA pseudouridylate synthase domain-containing protein 1. (291 aa)
	WH47_06815	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (243 aa)
	WH47_02153	Exosome complex component RRP40. (245 aa)
	WH47_06844	Activator of basal transcription 1. (220 aa)
	WH47_06776	Serine/threonine-protein kinase RIO1. (398 aa)
	WH47_02116	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (578 aa)
	WH47_02129	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
	WH47_04964	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (156 aa)
	WH47_01743	60S ribosomal protein L10a. (215 aa)
	WH47_05019	RRP12-like protein. (1310 aa)
	WH47_01753	Ribosomal RNA processing protein 1 like protein. (728 aa)
	WH47_06250	tRNA methyltransferase 112 like protein. (124 aa)
	WH47_06239	Exosome complex component RRP42. (256 aa)
	WH47_00914	Putative rRNA-processing protein EBP2 like protein. (319 aa)
	WH47_06257	Nucleolar protein 56. (462 aa)
	WH47_02378	Exosome complex component RRP45. (410 aa)
	WH47_05893	DDB1-and CUL4-associated factor 13. (445 aa)

Your Current Organism:

Habropoda laboriosa

NCBI taxonomy Id: 597456
Other names: H. laboriosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF6	WH47_00196	A0A0L7RB36	A0A0L7R1H6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	RRP15-like protein.	0.677
EIF6	WH47_00914	A0A0L7RB36	A0A0L7RK73	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Putative rRNA-processing protein EBP2 like protein.	0.970
EIF6	WH47_01274	A0A0L7RB36	A0A0L7QZA1	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Nuclear nucleic acid-binding protein C1D.	0.690
EIF6	WH47_01328	A0A0L7RB36	A0A0L7R2X0	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.952
EIF6	WH47_01401	A0A0L7RB36	A0A0L7QJS7	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	RNA helicase.	0.962
EIF6	WH47_01471	A0A0L7RB36	A0A0L7R0E0	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.767
EIF6	WH47_01645	A0A0L7RB36	A0A0L7R3Z6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Uncharacterized protein.	0.677
EIF6	WH47_01743	A0A0L7RB36	A0A0L7RJQ2	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	60S ribosomal protein L10a.	0.964
EIF6	WH47_01753	A0A0L7RB36	A0A0L7RJR2	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosomal RNA processing protein 1 like protein.	0.949
EIF6	WH47_02002	A0A0L7RB36	A0A0L7R2N4	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosomal L1 domain-containing protein.	0.958
EIF6	WH47_02057	A0A0L7RB36	A0A0L7QZN4	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.	0.869
EIF6	WH47_02116	A0A0L7RB36	A0A0L7RJ30	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.982
EIF6	WH47_02425	A0A0L7RB36	A0A0L7QWN0	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	MKI67 FHA domain-interacting nucleolar phosphoprotein-like.	0.933
EIF6	WH47_02658	A0A0L7RB36	A0A0L7QX82	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.679
EIF6	WH47_02928	A0A0L7RB36	A0A0L7QY49	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosome biogenesis protein BOP1 like protein.	0.978
EIF6	WH47_03477	A0A0L7RB36	A0A0L7RBT7	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Superkiller viralicidic activity 2-like 2.	0.686
EIF6	WH47_03858	A0A0L7RB36	A0A0L7QWR3	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosome biogenesis protein BRX1 like protein.	0.955
EIF6	WH47_04408	A0A0L7RB36	A0A0L7QR88	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribosome biogenesis protein NSA2 like protein.	0.983
EIF6	WH47_04610	A0A0L7RB36	A0A0L7R2B1	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	DEAD-box ATP-dependent RNA helicase 28; Belongs to the DEAD box helicase family.	0.754
EIF6	WH47_04964	A0A0L7RB36	A0A0L7RJK3	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.833