(70 nodes) Mushroom body development network (Habropoda laboriosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WH47_12850	Ribonuclease 3. (1309 aa)
	WH47_07286	Neurobeachin. (2708 aa)
	WH47_07292	Uncharacterized protein. (58 aa)
	WH47_08751	Homeotic protein distal-less. (342 aa)
	WH47_00937	Exportin-6. (1032 aa)
	WH47_00872	ARF GTPase-activating protein GIT1. (676 aa)
	WH47_10941	Inositol 1,4,5-trisphosphate receptor. (2988 aa)
	WH47_10961	Ephrin-B1; Belongs to the ephrin family. (333 aa)
	WH47_12165	Disheveled-associated activator of morphogenesis 2. (1207 aa)
	WH47_03226	Growth/differentiation factor 11. (181 aa)
	WH47_03236	Dynein heavy chain, cytoplasmic. (4616 aa)
	WH47_03370	Rho GTPase-activating protein 190. (1654 aa)
	WH47_03209	Non-specific serine/threonine protein kinase. (694 aa)
	WH47_03249	Mothers against decapentaplegic homolog. (426 aa)
	WH47_06449	PTB domain-containing adapter protein ced-6. (459 aa)
	WH47_06332	Transcription factor castor. (1246 aa)
	WH47_06437	Ephrin type-A receptor 4-B. (1107 aa)
	WH47_06551	Growth/differentiation factor 11. (398 aa)
	WH47_06552	Inhibin beta chain. (440 aa)
	WH47_10863	Protocadherin-like wing polarity protein stan; Belongs to the G-protein coupled receptor 2 family. (3136 aa)
	WH47_05948	Paired box protein Pax-6. (394 aa)
	WH47_05952	Paired box protein Pax-6. (333 aa)
	WH47_05521	Paired box protein Pax-6. (506 aa)
	WH47_05556	Ethanolamine kinase. (348 aa)
	WH47_07861	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (323 aa)
	WH47_07500	Serine/threonine-protein kinase TAO1. (897 aa)
	WH47_08341	Uncharacterized protein. (86 aa)
	WH47_08340	Dystonin. (8046 aa)
	WH47_08369	Down syndrome cell adhesion molecule-like protein Dscam2. (3669 aa)
	WH47_02153	Exosome complex component RRP40. (245 aa)
	WH47_02158	DNA ligase; Belongs to the ubiquitin-activating E1 family. (1940 aa)
	WH47_12755	Uncharacterized protein. (1182 aa)
	WH47_12754	Uncharacterized protein. (650 aa)
	WH47_12749	Mitogen-activated protein kinase. (593 aa)
	WH47_04622	Microprocessor complex subunit DGCR8. (626 aa)
	WH47_00269	Neuroglian. (1239 aa)
	WH47_00211	Alcohol dehydrogenase [NADP(+)]. (330 aa)
	WH47_11990	Protein phosphatase Slingshot like protein 2. (122 aa)
	WH47_11986	Protein phosphatase Slingshot. (1027 aa)
	WH47_01589	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase. (480 aa)
	WH47_01491	Reticulon-4-interacting protein 1, mitochondrial. (393 aa)
	WH47_12547	Basic helix-loop-helix neural transcription factor TAP. (231 aa)
	WH47_01271	U3 small nucleolar RNA-associated protein 14 like protein A. (832 aa)
	WH47_01308	Fragile X mental retardation syndrome-related protein 1. (636 aa)
	WH47_02197	1,5-anhydro-D-fructose reductase. (141 aa)
	WH47_01144	Uncharacterized protein. (865 aa)
	WH47_03156	Dachshund like protein 1. (255 aa)
	WH47_03154	Dachshund like protein 1. (451 aa)
	WH47_03153	Uncharacterized protein. (185 aa)
	WH47_02701	Tyrosine-protein phosphatase non-receptor type 4. (898 aa)
	WH47_05288	Aldose reductase. (188 aa)
	WH47_05291	Alcohol dehydrogenase [NADP(+)]. (319 aa)
	WH47_05287	Aldose reductase. (283 aa)
	WH47_04063	Protein bunched, class 2/F/G isoform. (710 aa)
	WH47_06190	Formin-like protein. (1119 aa)
	WH47_06154	Alcohol dehydrogenase [NADP(+)]. (301 aa)
	WH47_02975	Fasciclin-2. (817 aa)
	WH47_05055	Triple functional domain protein. (3031 aa)
	WH47_06617	Photoreceptor-specific nuclear receptor. (678 aa)
	WH47_06601	Putative nuclear hormone receptor HR3. (868 aa)
	WH47_05618	DNA helicase. (824 aa)
	WH47_07741	Protein bric-a-brac 2. (577 aa)
	WH47_08702	Beta-amyloid-like protein. (768 aa)
	WH47_08594	Protein SGT1 like protein ecdysoneless. (623 aa)
	WH47_07774	Uncharacterized protein. (1641 aa)
	WH47_09074	Nuclear receptor subfamily 2 group E member 1. (364 aa)
	WH47_12447	Cofilin/actin-depolymerizing factor like protein; Belongs to the actin-binding proteins ADF family. (147 aa)
	WH47_11895	Uncharacterized protein. (296 aa)
	WH47_11483	Ras GTPase-activating protein 1. (929 aa)
	WH47_01387	Structural maintenance of chromosomes protein. (1213 aa)

Your Current Organism:

Habropoda laboriosa

NCBI taxonomy Id: 597456
Other names: H. laboriosa

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WH47_00211	WH47_06154	A0A0L7R1J1	A0A0L7QTL5	Alcohol dehydrogenase [NADP(+)].	Alcohol dehydrogenase [NADP(+)].	0.837
WH47_00269	WH47_02701	A0A0L7R1U9	A0A0L7QX47	Neuroglian.	Tyrosine-protein phosphatase non-receptor type 4.	0.488
WH47_00269	WH47_02975	A0A0L7R1U9	A0A0L7QSU1	Neuroglian.	Fasciclin-2.	0.887
WH47_00269	WH47_06332	A0A0L7R1U9	A0A0L7RCR2	Neuroglian.	Transcription factor castor.	0.416
WH47_00269	WH47_06437	A0A0L7R1U9	A0A0L7RCX9	Neuroglian.	Ephrin type-A receptor 4-B.	0.700
WH47_00269	WH47_08369	A0A0L7R1U9	A0A0L7RGZ7	Neuroglian.	Down syndrome cell adhesion molecule-like protein Dscam2.	0.427
WH47_00269	WH47_08702	A0A0L7R1U9	A0A0L7QNY0	Neuroglian.	Beta-amyloid-like protein.	0.933
WH47_00269	WH47_12754	A0A0L7R1U9	A0A0L7R4Z4	Neuroglian.	Uncharacterized protein.	0.434
WH47_00269	WH47_12755	A0A0L7R1U9	A0A0L7R5B8	Neuroglian.	Uncharacterized protein.	0.434
WH47_00872	WH47_03209	A0A0L7R740	A0A0L7RBC7	ARF GTPase-activating protein GIT1.	Non-specific serine/threonine protein kinase.	0.833
WH47_00872	WH47_05055	A0A0L7R740	A0A0L7QSK7	ARF GTPase-activating protein GIT1.	Triple functional domain protein.	0.620
WH47_00872	WH47_06437	A0A0L7R740	A0A0L7RCX9	ARF GTPase-activating protein GIT1.	Ephrin type-A receptor 4-B.	0.637
WH47_00872	WH47_07861	A0A0L7R740	A0A0L7RFR1	ARF GTPase-activating protein GIT1.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.401
WH47_00872	WH47_08340	A0A0L7R740	A0A0L7RGX0	ARF GTPase-activating protein GIT1.	Dystonin.	0.604
WH47_00872	WH47_08341	A0A0L7R740	A0A0L7RGU5	ARF GTPase-activating protein GIT1.	Uncharacterized protein.	0.604
WH47_00872	WH47_10961	A0A0L7R740	A0A0L7R9K1	ARF GTPase-activating protein GIT1.	Ephrin-B1; Belongs to the ephrin family.	0.749
WH47_01144	WH47_02975	A0A0L7QYV8	A0A0L7QSU1	Uncharacterized protein.	Fasciclin-2.	0.406
WH47_01144	WH47_08369	A0A0L7QYV8	A0A0L7RGZ7	Uncharacterized protein.	Down syndrome cell adhesion molecule-like protein Dscam2.	0.537
WH47_01308	WH47_04622	A0A0L7QZG7	A0A0L7R2C8	Fragile X mental retardation syndrome-related protein 1.	Microprocessor complex subunit DGCR8.	0.502
WH47_01308	WH47_12850	A0A0L7QZG7	A0A0L7R5L2	Fragile X mental retardation syndrome-related protein 1.	Ribonuclease 3.	0.625