(8 nodes) Exon-exon junction complex network (Habropoda laboriosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WH47_11828	Protein mago nashi. (146 aa)
	WH47_09270	Regulator of nonsense transcripts 2. (1085 aa)
	WH47_09633	Protein CASC3. (796 aa)
	WH47_06730	Serine/arginine repetitive matrix protein 1. (1168 aa)
	WH47_10559	R3H and coiled-coil domain-containing protein 1-like. (603 aa)
	WH47_04347	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (166 aa)
	WH47_07338	Uncharacterized protein. (728 aa)
	WH47_08837	Partner of Y14 and mago. (216 aa)

Your Current Organism:

Habropoda laboriosa

NCBI taxonomy Id: 597456
Other names: H. laboriosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WH47_04347	WH47_06730	A0A0L7QRF4	A0A0L7RIJ7	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Serine/arginine repetitive matrix protein 1.	0.870
WH47_04347	WH47_08837	A0A0L7QRF4	A0A0L7R6J4	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Partner of Y14 and mago.	0.999
WH47_04347	WH47_09270	A0A0L7QRF4	A0A0L7R946	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Regulator of nonsense transcripts 2.	0.993
WH47_04347	WH47_09633	A0A0L7QRF4	A0A0L7REC0	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Protein CASC3.	0.999
WH47_04347	WH47_11828	A0A0L7QRF4	A0A0L7R8S6	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Protein mago nashi.	0.999
WH47_06730	WH47_04347	A0A0L7RIJ7	A0A0L7QRF4	Serine/arginine repetitive matrix protein 1.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.870
WH47_06730	WH47_09270	A0A0L7RIJ7	A0A0L7R946	Serine/arginine repetitive matrix protein 1.	Regulator of nonsense transcripts 2.	0.967
WH47_06730	WH47_09633	A0A0L7RIJ7	A0A0L7REC0	Serine/arginine repetitive matrix protein 1.	Protein CASC3.	0.710
WH47_06730	WH47_11828	A0A0L7RIJ7	A0A0L7R8S6	Serine/arginine repetitive matrix protein 1.	Protein mago nashi.	0.897
WH47_08837	WH47_04347	A0A0L7R6J4	A0A0L7QRF4	Partner of Y14 and mago.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.999
WH47_08837	WH47_11828	A0A0L7R6J4	A0A0L7R8S6	Partner of Y14 and mago.	Protein mago nashi.	0.993
WH47_09270	WH47_04347	A0A0L7R946	A0A0L7QRF4	Regulator of nonsense transcripts 2.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.993
WH47_09270	WH47_06730	A0A0L7R946	A0A0L7RIJ7	Regulator of nonsense transcripts 2.	Serine/arginine repetitive matrix protein 1.	0.967
WH47_09270	WH47_09633	A0A0L7R946	A0A0L7REC0	Regulator of nonsense transcripts 2.	Protein CASC3.	0.905
WH47_09270	WH47_11828	A0A0L7R946	A0A0L7R8S6	Regulator of nonsense transcripts 2.	Protein mago nashi.	0.868
WH47_09633	WH47_04347	A0A0L7REC0	A0A0L7QRF4	Protein CASC3.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.999
WH47_09633	WH47_06730	A0A0L7REC0	A0A0L7RIJ7	Protein CASC3.	Serine/arginine repetitive matrix protein 1.	0.710
WH47_09633	WH47_09270	A0A0L7REC0	A0A0L7R946	Protein CASC3.	Regulator of nonsense transcripts 2.	0.905
WH47_09633	WH47_11828	A0A0L7REC0	A0A0L7R8S6	Protein CASC3.	Protein mago nashi.	0.992
WH47_11828	WH47_04347	A0A0L7R8S6	A0A0L7QRF4	Protein mago nashi.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.999