(6 nodes) Nuclear pore central transport channel network (Habropoda laboriosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WH47_04271	Nuclear pore complex protein Nup98-Nup96. (1893 aa)
	WH47_02690	Nuclear pore glycoprotein p62. (445 aa)
	WH47_01135	Putative nuclear transport factor 2. (166 aa)
	WH47_02026	Nuclear pore complex protein Nup153. (1390 aa)
	WH47_12805	Putative nucleoporin Nup54. (627 aa)
	WH47_12430	NTF2-related export protein. (110 aa)

Your Current Organism:

Habropoda laboriosa

NCBI taxonomy Id: 597456
Other names: H. laboriosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WH47_01135	WH47_02026	A0A0L7QYW1	A0A0L7R310	Putative nuclear transport factor 2.	Nuclear pore complex protein Nup153.	0.745
WH47_01135	WH47_02690	A0A0L7QYW1	A0A0L7QX93	Putative nuclear transport factor 2.	Nuclear pore glycoprotein p62.	0.737
WH47_01135	WH47_04271	A0A0L7QYW1	A0A0L7QVG1	Putative nuclear transport factor 2.	Nuclear pore complex protein Nup98-Nup96.	0.565
WH47_01135	WH47_12430	A0A0L7QYW1	A0A0L7R846	Putative nuclear transport factor 2.	NTF2-related export protein.	0.593
WH47_01135	WH47_12805	A0A0L7QYW1	A0A0L7R5H0	Putative nuclear transport factor 2.	Putative nucleoporin Nup54.	0.630
WH47_02026	WH47_01135	A0A0L7R310	A0A0L7QYW1	Nuclear pore complex protein Nup153.	Putative nuclear transport factor 2.	0.745
WH47_02026	WH47_02690	A0A0L7R310	A0A0L7QX93	Nuclear pore complex protein Nup153.	Nuclear pore glycoprotein p62.	0.911
WH47_02026	WH47_04271	A0A0L7R310	A0A0L7QVG1	Nuclear pore complex protein Nup153.	Nuclear pore complex protein Nup98-Nup96.	0.955
WH47_02026	WH47_12430	A0A0L7R310	A0A0L7R846	Nuclear pore complex protein Nup153.	NTF2-related export protein.	0.706
WH47_02026	WH47_12805	A0A0L7R310	A0A0L7R5H0	Nuclear pore complex protein Nup153.	Putative nucleoporin Nup54.	0.990
WH47_02690	WH47_01135	A0A0L7QX93	A0A0L7QYW1	Nuclear pore glycoprotein p62.	Putative nuclear transport factor 2.	0.737
WH47_02690	WH47_02026	A0A0L7QX93	A0A0L7R310	Nuclear pore glycoprotein p62.	Nuclear pore complex protein Nup153.	0.911
WH47_02690	WH47_04271	A0A0L7QX93	A0A0L7QVG1	Nuclear pore glycoprotein p62.	Nuclear pore complex protein Nup98-Nup96.	0.981
WH47_02690	WH47_12430	A0A0L7QX93	A0A0L7R846	Nuclear pore glycoprotein p62.	NTF2-related export protein.	0.761
WH47_02690	WH47_12805	A0A0L7QX93	A0A0L7R5H0	Nuclear pore glycoprotein p62.	Putative nucleoporin Nup54.	0.999
WH47_04271	WH47_01135	A0A0L7QVG1	A0A0L7QYW1	Nuclear pore complex protein Nup98-Nup96.	Putative nuclear transport factor 2.	0.565
WH47_04271	WH47_02026	A0A0L7QVG1	A0A0L7R310	Nuclear pore complex protein Nup98-Nup96.	Nuclear pore complex protein Nup153.	0.955
WH47_04271	WH47_02690	A0A0L7QVG1	A0A0L7QX93	Nuclear pore complex protein Nup98-Nup96.	Nuclear pore glycoprotein p62.	0.981
WH47_04271	WH47_12430	A0A0L7QVG1	A0A0L7R846	Nuclear pore complex protein Nup98-Nup96.	NTF2-related export protein.	0.747
WH47_04271	WH47_12805	A0A0L7QVG1	A0A0L7R5H0	Nuclear pore complex protein Nup98-Nup96.	Putative nucleoporin Nup54.	0.985