4 items (Habropoda laboriosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WH47_06625	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (607 aa)
	WH47_07495	PAP-associated domain-containing protein 5. (573 aa)
	WH47_03650	Speckle targeted PIP5K1A-regulated poly(A) polymerase. (394 aa)
	WH47_04045	Poly(A) RNA polymerase gld-2 like protein A. (648 aa)

Your Current Organism:

Habropoda laboriosa

NCBI taxonomy Id: 597456
Other names: H. laboriosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WH47_04045	WH47_06625	A0A0L7QUF1	A0A0L7QRR3	Poly(A) RNA polymerase gld-2 like protein A.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.575
WH47_04045	WH47_07495	A0A0L7QUF1	A0A0L7RFX3	Poly(A) RNA polymerase gld-2 like protein A.	PAP-associated domain-containing protein 5.	0.507
WH47_06625	WH47_04045	A0A0L7QRR3	A0A0L7QUF1	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Poly(A) RNA polymerase gld-2 like protein A.	0.575
WH47_06625	WH47_07495	A0A0L7QRR3	A0A0L7RFX3	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	PAP-associated domain-containing protein 5.	0.675
WH47_07495	WH47_04045	A0A0L7RFX3	A0A0L7QUF1	PAP-associated domain-containing protein 5.	Poly(A) RNA polymerase gld-2 like protein A.	0.507
WH47_07495	WH47_06625	A0A0L7RFX3	A0A0L7QRR3	PAP-associated domain-containing protein 5.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.675