STRINGSTRING
WH47_00931 WH47_00931 WH47_11574 WH47_11574 WH47_09257 WH47_09257 WH47_11828 WH47_11828 WH47_00929 WH47_00929 WH47_00679 WH47_00679 WH47_10951 WH47_10951 WH47_09633 WH47_09633 WH47_05953 WH47_05953 WH47_09341 WH47_09341 WH47_05954 WH47_05954 WH47_07037 WH47_07037 WH47_07616 WH47_07616 WH47_08287 WH47_08287 WH47_06730 WH47_06730 WH47_02159 WH47_02159 WH47_10151 WH47_10151 WH47_09820 WH47_09820 WH47_10047 WH47_10047 WH47_01003 WH47_01003 WH47_09894 WH47_09894 WH47_12846 WH47_12846 WH47_02004 WH47_02004 WH47_02005 WH47_02005 WH47_00234 WH47_00234 WH47_12096 WH47_12096 WH47_01468 WH47_01468 WH47_03026 WH47_03026 WH47_05789 WH47_05789 WH47_05146 WH47_05146 WH47_06625 WH47_06625 WH47_04347 WH47_04347 WH47_05713 WH47_05713 WH47_07439 WH47_07439 WH47_07664 WH47_07664 WH47_07665 WH47_07665 WH47_10575 WH47_10575 WH47_11300 WH47_11300 WH47_01207 WH47_01207 WH47_01208 WH47_01208 WH47_03100 WH47_03100 WH47_02637 WH47_02637 WH47_03865 WH47_03865 WH47_03118 WH47_03118 WH47_05038 WH47_05038 WH47_04146 WH47_04146 WH47_04170 WH47_04170 WH47_05331 WH47_05331 WH47_03957 WH47_03957 WH47_05200 WH47_05200 WH47_09482 WH47_09482 WH47_10832 WH47_10832 WH47_10712 WH47_10712 WH47_12248 WH47_12248 WH47_12322 WH47_12322 WH47_11388 WH47_11388 WH47_10488 WH47_10488 WH47_00666 WH47_00666 WH47_04991 WH47_04991 WH47_01752 WH47_01752 WH47_10972 WH47_10972 WH47_01011 WH47_01011 WH47_07386 WH47_07386 WH47_07395 WH47_07395
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WH47_00931Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (165 aa)
WH47_11574Polyadenylate-binding protein 2. (228 aa)
WH47_09257Cleavage and polyadenylation specificity factor subunit 1. (1332 aa)
WH47_11828Protein mago nashi. (146 aa)
WH47_00929Small nuclear ribonucleoprotein-associated protein B. (185 aa)
WH47_00679Uncharacterized protein. (179 aa)
WH47_10951Uncharacterized protein. (275 aa)
WH47_09633Protein CASC3. (796 aa)
WH47_05953Uncharacterized protein. (212 aa)
WH47_09341Serine/arginine-rich splicing factor 2. (175 aa)
WH47_05954Zinc finger CCCH domain-containing protein 11A. (164 aa)
WH47_07037ATP-dependent RNA helicase WM6. (447 aa)
WH47_07616Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1056 aa)
WH47_08287RNA-binding protein Rsf1. (239 aa)
WH47_06730Serine/arginine repetitive matrix protein 1. (1168 aa)
WH47_02159THO complex subunit 6 like protein. (298 aa)
WH47_10151Cleavage and polyadenylation specificity factor subunit 4. (286 aa)
WH47_09820Uncharacterized protein. (621 aa)
WH47_10047Regulator of nonsense transcripts 3A. (653 aa)
WH47_01003RNA-binding protein with serine-rich domain 1. (285 aa)
WH47_09894THO complex subunit 7 like protein. (180 aa)
WH47_12846U7 snRNA-associated Sm-like protein LSm11. (238 aa)
WH47_02004U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (310 aa)
WH47_02005Splicing factor U2AF 50 kDa subunit. (85 aa)
WH47_00234Eukaryotic initiation factor 4A-III. (403 aa)
WH47_12096THO complex subunit 5 like protein. (666 aa)
WH47_01468Protein CLP1 like protein. (356 aa)
WH47_03026Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
WH47_05789Tumor protein p63-regulated gene 1 protein. (295 aa)
WH47_05146Putative splicing factor, arginine/serine-rich 7. (436 aa)
WH47_06625Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (607 aa)
WH47_04347RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (166 aa)
WH47_05713SAP domain-containing ribonucleoprotein. (263 aa)
WH47_07439Cleavage stimulation factor subunit 2. (441 aa)
WH47_07664Uncharacterized protein. (49 aa)
WH47_07665Polymerase delta-interacting protein 3. (427 aa)
WH47_10575Histone RNA hairpin-binding protein. (227 aa)
WH47_11300Small nuclear ribonucleoprotein G. (76 aa)
WH47_01207Uncharacterized protein. (722 aa)
WH47_01208Chitin-binding type-2 domain-containing protein. (148 aa)
WH47_03100Serine/arginine-rich splicing factor RS2Z33. (381 aa)
WH47_02637Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (228 aa)
WH47_03865Splicing factor U2af 38 kDa subunit. (241 aa)
WH47_03118Cleavage and polyadenylation specificity factor subunit 3. (686 aa)
WH47_05038Serine/arginine-rich splicing factor RS2Z33. (374 aa)
WH47_04146Zinc finger matrin-type protein. (1231 aa)
WH47_04170Symplekin. (1100 aa)
WH47_05331THO complex subunit 1. (655 aa)
WH47_03957Nuclear cap-binding protein subunit 1. (669 aa)
WH47_05200Serine/arginine-rich splicing factor 1. (234 aa)
WH47_09482Pre-mRNA-processing factor 17. (582 aa)
WH47_10832Cleavage stimulation factor subunit 1. (436 aa)
WH47_10712Pre-mRNA 3' end processing protein WDR33. (1052 aa)
WH47_12248Small nuclear ribonucleoprotein Sm D3. (142 aa)
WH47_12322THO complex subunit 2. (1415 aa)
WH47_11388Zinc finger CCCH domain-containing protein 13. (1314 aa)
WH47_10488Protein suppressor of forked. (705 aa)
WH47_00666Cleavage and polyadenylation specificity factor subunit 2. (737 aa)
WH47_04991Pre-mRNA-splicing factor SLU7. (551 aa)
WH47_01752Serine/arginine-rich splicing factor 7. (127 aa)
WH47_10972RNA and export factor-binding protein 2. (249 aa)
WH47_01011Serine-arginine protein 55. (404 aa)
WH47_07386Cleavage and polyadenylation specificity factor subunit. (808 aa)
WH47_07395THO complex subunit 3. (320 aa)
Your Current Organism:
Habropoda laboriosa
NCBI taxonomy Id: 597456
Other names: H. laboriosa
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