STRINGSTRING
WH47_01468 WH47_01468 WH47_02637 WH47_02637 WH47_03118 WH47_03118 WH47_04170 WH47_04170 WH47_06625 WH47_06625 WH47_07439 WH47_07439 WH47_10575 WH47_10575 WH47_11300 WH47_11300 WH47_03957 WH47_03957 WH47_10832 WH47_10832 WH47_10712 WH47_10712 WH47_12248 WH47_12248 WH47_10488 WH47_10488 WH47_03026 WH47_03026 WH47_11574 WH47_11574 WH47_09257 WH47_09257 WH47_00929 WH47_00929 WH47_00931 WH47_00931 WH47_07386 WH47_07386 WH47_12846 WH47_12846 WH47_10151 WH47_10151 WH47_00666 WH47_00666 WH47_09820 WH47_09820
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WH47_01468Protein CLP1 like protein. (356 aa)
WH47_02637Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (228 aa)
WH47_03118Cleavage and polyadenylation specificity factor subunit 3. (686 aa)
WH47_04170Symplekin. (1100 aa)
WH47_06625Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (607 aa)
WH47_07439Cleavage stimulation factor subunit 2. (441 aa)
WH47_10575Histone RNA hairpin-binding protein. (227 aa)
WH47_11300Small nuclear ribonucleoprotein G. (76 aa)
WH47_03957Nuclear cap-binding protein subunit 1. (669 aa)
WH47_10832Cleavage stimulation factor subunit 1. (436 aa)
WH47_10712Pre-mRNA 3' end processing protein WDR33. (1052 aa)
WH47_12248Small nuclear ribonucleoprotein Sm D3. (142 aa)
WH47_10488Protein suppressor of forked. (705 aa)
WH47_03026Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
WH47_11574Polyadenylate-binding protein 2. (228 aa)
WH47_09257Cleavage and polyadenylation specificity factor subunit 1. (1332 aa)
WH47_00929Small nuclear ribonucleoprotein-associated protein B. (185 aa)
WH47_00931Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (165 aa)
WH47_07386Cleavage and polyadenylation specificity factor subunit. (808 aa)
WH47_12846U7 snRNA-associated Sm-like protein LSm11. (238 aa)
WH47_10151Cleavage and polyadenylation specificity factor subunit 4. (286 aa)
WH47_00666Cleavage and polyadenylation specificity factor subunit 2. (737 aa)
WH47_09820Uncharacterized protein. (621 aa)
Your Current Organism:
Habropoda laboriosa
NCBI taxonomy Id: 597456
Other names: H. laboriosa
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