STRINGSTRING
NAMH_0552 NAMH_0552 napB napB NAMH_0554 NAMH_0554 NAMH_0555 NAMH_0555 napA napA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NAMH_0552Periplasmic nitrate reductase, NapF subunit; Identified by match to protein family HMM PF00037. (156 aa)
napBPeriplasmic nitrate reductase, diahem cytochrome C subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (157 aa)
NAMH_0554Periplasmic nitrate reductase, NapH subunit; Identified by match to protein family HMM PF00037; match to protein family HMM TIGR02163. (281 aa)
NAMH_0555Periplasmic nitrate reductase, NapG subunit; Identified by match to protein family HMM PF00037; match to protein family HMM TIGR00397. (273 aa)
napAPeriplasmic nitrate reductase, NapA large catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (937 aa)
Your Current Organism:
Nautilia profundicola
NCBI taxonomy Id: 598659
Other names: N. profundicola AmH, Nautilia profundicola AmH, Nautilia profundicola str. AmH, Nautilia profundicola strain AmH, Nautilia sp. AmH, epsilon proteobacterium AmH
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