(11 nodes) Bacterial chemotaxis network (Nautilia profundicola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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Your Input:
	NAMH_0080	Chemotaxis sensory transducer; Identified by match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229. (138 aa)
	NAMH_0134	Chemotaxis response regulator; Identified by match to protein family HMM PF00072. (125 aa)
	NAMH_0356	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672. (651 aa)
	NAMH_0361	Chemotaxis protein ec 2.7.3; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584. (316 aa)
	NAMH_0362	Chemotaxis protein CheA; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895. (834 aa)
	NAMH_0364	Purine-binding chemotaxis protein chew; Identified by match to protein family HMM PF01584. (172 aa)
	NAMH_0679	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672. (532 aa)
	NAMH_0824	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF08376. (785 aa)
	NAMH_1064	Mcp-signal transduction protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672. (649 aa)
	NAMH_1397	Identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF08376. (661 aa)
	NAMH_1443	Putative mcp-domain signal transduction protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672. (566 aa)

Your Current Organism:

Nautilia profundicola

NCBI taxonomy Id: 598659
Other names: N. profundicola AmH, Nautilia profundicola AmH, Nautilia profundicola str. AmH, Nautilia profundicola strain AmH, Nautilia sp. AmH, epsilon proteobacterium AmH

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
NAMH_0080	NAMH_0356	Chemotaxis sensory transducer; Identified by match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229.	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	0.865
NAMH_0080	NAMH_0361	Chemotaxis sensory transducer; Identified by match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229.	Chemotaxis protein ec 2.7.3; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584.	0.453
NAMH_0080	NAMH_0679	Chemotaxis sensory transducer; Identified by match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229.	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	0.906
NAMH_0080	NAMH_1064	Chemotaxis sensory transducer; Identified by match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229.	Mcp-signal transduction protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	0.906
NAMH_0080	NAMH_1397	Chemotaxis sensory transducer; Identified by match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229.	Identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF08376.	0.729
NAMH_0080	NAMH_1443	Chemotaxis sensory transducer; Identified by match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229.	Putative mcp-domain signal transduction protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	0.894
NAMH_0134	NAMH_0356	Chemotaxis response regulator; Identified by match to protein family HMM PF00072.	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	0.931
NAMH_0134	NAMH_0361	Chemotaxis response regulator; Identified by match to protein family HMM PF00072.	Chemotaxis protein ec 2.7.3; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584.	0.428
NAMH_0134	NAMH_0362	Chemotaxis response regulator; Identified by match to protein family HMM PF00072.	Chemotaxis protein CheA; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895.	0.948
NAMH_0134	NAMH_0364	Chemotaxis response regulator; Identified by match to protein family HMM PF00072.	Purine-binding chemotaxis protein chew; Identified by match to protein family HMM PF01584.	0.940
NAMH_0134	NAMH_0679	Chemotaxis response regulator; Identified by match to protein family HMM PF00072.	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	0.931
NAMH_0134	NAMH_0824	Chemotaxis response regulator; Identified by match to protein family HMM PF00072.	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF08376.	0.935
NAMH_0134	NAMH_1064	Chemotaxis response regulator; Identified by match to protein family HMM PF00072.	Mcp-signal transduction protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	0.935
NAMH_0134	NAMH_1397	Chemotaxis response regulator; Identified by match to protein family HMM PF00072.	Identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF08376.	0.451
NAMH_0134	NAMH_1443	Chemotaxis response regulator; Identified by match to protein family HMM PF00072.	Putative mcp-domain signal transduction protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	0.928
NAMH_0356	NAMH_0080	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	Chemotaxis sensory transducer; Identified by match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229.	0.865
NAMH_0356	NAMH_0134	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	Chemotaxis response regulator; Identified by match to protein family HMM PF00072.	0.931
NAMH_0356	NAMH_0361	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	Chemotaxis protein ec 2.7.3; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584.	0.997
NAMH_0356	NAMH_0362	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	Chemotaxis protein CheA; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895.	0.998
NAMH_0356	NAMH_0364	Methyl-accepting chemotaxis sensory transducer; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	Purine-binding chemotaxis protein chew; Identified by match to protein family HMM PF01584.	0.991

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