STRINGSTRING
NAMH_1721 NAMH_1721 NAMH_1724 NAMH_1724 NAMH_1719 NAMH_1719 NAMH_1718 NAMH_1718 rfaF rfaF NAMH_1661 NAMH_1661
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NAMH_1721Putative lipopolysaccharide heptosyltransferase III; Identified by match to protein family HMM PF01075; match to protein family HMM TIGR02201. (352 aa)
NAMH_1724Lipopolysaccharide heptosyltransferase I; Identified by match to protein family HMM PF01075. (305 aa)
NAMH_1719Putative heptosyliii transferase; Identified by match to protein family HMM PF01075. (312 aa)
NAMH_1718Glycosyl transferase, family 9; Identified by match to protein family HMM PF01075. (360 aa)
rfaFLipopolysaccharide heptosyltransferase II; Identified by match to protein family HMM PF01075; match to protein family HMM TIGR02195. (293 aa)
NAMH_1661Identified by match to protein family HMM PF01075. (384 aa)
Your Current Organism:
Nautilia profundicola
NCBI taxonomy Id: 598659
Other names: N. profundicola AmH, Nautilia profundicola AmH, Nautilia profundicola str. AmH, Nautilia profundicola strain AmH, Nautilia sp. AmH, epsilon proteobacterium AmH
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