22 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHAD	Uncharacterized protein. (361 aa)
	U3JF23_FICAL	Uncharacterized protein. (250 aa)
	TLN1	Talin 1. (2544 aa)
	PTK2	Protein tyrosine kinase 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1137 aa)
	ITGB6	Integrin beta; Belongs to the integrin beta chain family. (791 aa)
	ITGAV	Integrin subunit alpha V; Belongs to the integrin alpha chain family. (998 aa)
	U3JPP6_FICAL	VWFA domain-containing protein. (535 aa)
	VTN	SMB domain-containing protein. (433 aa)
	VCL	Vinculin. (1168 aa)
	PXN	Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family. (572 aa)
	ITGA8	Integrin subunit alpha 8; Belongs to the integrin alpha chain family. (1044 aa)
	ITGB3	Integrin beta; Belongs to the integrin beta chain family. (780 aa)
	FLNB	Filamin B. (2652 aa)
	TNR	Tenascin R. (1355 aa)
	ITGA2B	Integrin subunit alpha 2b; Belongs to the integrin alpha chain family. (1020 aa)
	ITGB8	Integrin beta; Belongs to the integrin beta chain family. (768 aa)
	ITGA11	Integrin subunit alpha 11; Belongs to the integrin alpha chain family. (1190 aa)
	ITGA1	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (653 aa)
	ITGA2	Integrin subunit alpha 2; Belongs to the integrin alpha chain family. (1317 aa)
	TLN2	Talin 2. (2542 aa)
	FN1	Fibronectin 1. (2307 aa)
	ITGB5	Integrin beta; Belongs to the integrin beta chain family. (807 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHAD	ITGA1	ENSFALP00000001376	ENSFALP00000011207	Uncharacterized protein.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.665
CHAD	ITGA11	ENSFALP00000001376	ENSFALP00000010590	Uncharacterized protein.	Integrin subunit alpha 11; Belongs to the integrin alpha chain family.	0.675
CHAD	ITGA2	ENSFALP00000001376	ENSFALP00000011212	Uncharacterized protein.	Integrin subunit alpha 2; Belongs to the integrin alpha chain family.	0.905
CHAD	ITGA2B	ENSFALP00000001376	ENSFALP00000009953	Uncharacterized protein.	Integrin subunit alpha 2b; Belongs to the integrin alpha chain family.	0.661
CHAD	ITGA8	ENSFALP00000001376	ENSFALP00000007958	Uncharacterized protein.	Integrin subunit alpha 8; Belongs to the integrin alpha chain family.	0.661
CHAD	ITGAV	ENSFALP00000001376	ENSFALP00000004744	Uncharacterized protein.	Integrin subunit alpha V; Belongs to the integrin alpha chain family.	0.694
CHAD	ITGB3	ENSFALP00000001376	ENSFALP00000008416	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.673
CHAD	ITGB5	ENSFALP00000001376	ENSFALP00000014095	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.673
CHAD	ITGB6	ENSFALP00000001376	ENSFALP00000004615	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.677
CHAD	ITGB8	ENSFALP00000001376	ENSFALP00000010171	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.681
CHAD	U3JPP6_FICAL	ENSFALP00000001376	ENSFALP00000004750	Uncharacterized protein.	VWFA domain-containing protein.	0.665
FLNB	ITGA1	ENSFALP00000008680	ENSFALP00000011207	Filamin B.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.908
FLNB	ITGA11	ENSFALP00000008680	ENSFALP00000010590	Filamin B.	Integrin subunit alpha 11; Belongs to the integrin alpha chain family.	0.910
FLNB	ITGA2	ENSFALP00000008680	ENSFALP00000011212	Filamin B.	Integrin subunit alpha 2; Belongs to the integrin alpha chain family.	0.910
FLNB	ITGA2B	ENSFALP00000008680	ENSFALP00000009953	Filamin B.	Integrin subunit alpha 2b; Belongs to the integrin alpha chain family.	0.931
FLNB	ITGA8	ENSFALP00000008680	ENSFALP00000007958	Filamin B.	Integrin subunit alpha 8; Belongs to the integrin alpha chain family.	0.931
FLNB	ITGAV	ENSFALP00000008680	ENSFALP00000004744	Filamin B.	Integrin subunit alpha V; Belongs to the integrin alpha chain family.	0.925
FLNB	ITGB3	ENSFALP00000008680	ENSFALP00000008416	Filamin B.	Integrin beta; Belongs to the integrin beta chain family.	0.962
FLNB	ITGB5	ENSFALP00000008680	ENSFALP00000014095	Filamin B.	Integrin beta; Belongs to the integrin beta chain family.	0.952
FLNB	ITGB6	ENSFALP00000008680	ENSFALP00000004615	Filamin B.	Integrin beta; Belongs to the integrin beta chain family.	0.946