13 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	STAC	SH3 and cysteine rich domain. (402 aa)
	CCDC78	DUF4472 domain-containing protein. (529 aa)
	U3JWM1_FICAL	Uncharacterized protein. (339 aa)
	TNNC1	Troponin C1, slow skeletal and cardiac type. (161 aa)
	HOMER1	Homer scaffold protein 1. (355 aa)
	SYNM	Synemin; Belongs to the intermediate filament family. (1519 aa)
	TNNT3	Troponin T3, fast skeletal type. (266 aa)
	TNNI2	Troponin I2, fast skeletal type. (194 aa)
	R3HDM1	R3H domain containing 1. (1166 aa)
	R3HDM2	Uncharacterized protein. (889 aa)
	RCSD1	RCSD domain containing 1. (363 aa)
	TNNI1	Troponin I1, slow skeletal type. (187 aa)
	TNNC2	Troponin C2, fast skeletal type. (178 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TNNC1	TNNC2	ENSFALP00000009319	ENSFALP00000004756	Troponin C1, slow skeletal and cardiac type.	Troponin C2, fast skeletal type.	0.965
TNNC1	TNNI1	ENSFALP00000009319	ENSFALP00000002643	Troponin C1, slow skeletal and cardiac type.	Troponin I1, slow skeletal type.	0.974
TNNC1	TNNI2	ENSFALP00000009319	ENSFALP00000012205	Troponin C1, slow skeletal and cardiac type.	Troponin I2, fast skeletal type.	0.970
TNNC1	TNNT3	ENSFALP00000009319	ENSFALP00000012145	Troponin C1, slow skeletal and cardiac type.	Troponin T3, fast skeletal type.	0.824
TNNC2	TNNC1	ENSFALP00000004756	ENSFALP00000009319	Troponin C2, fast skeletal type.	Troponin C1, slow skeletal and cardiac type.	0.965
TNNC2	TNNI1	ENSFALP00000004756	ENSFALP00000002643	Troponin C2, fast skeletal type.	Troponin I1, slow skeletal type.	0.960
TNNC2	TNNI2	ENSFALP00000004756	ENSFALP00000012205	Troponin C2, fast skeletal type.	Troponin I2, fast skeletal type.	0.997
TNNC2	TNNT3	ENSFALP00000004756	ENSFALP00000012145	Troponin C2, fast skeletal type.	Troponin T3, fast skeletal type.	0.960
TNNI1	TNNC1	ENSFALP00000002643	ENSFALP00000009319	Troponin I1, slow skeletal type.	Troponin C1, slow skeletal and cardiac type.	0.974
TNNI1	TNNC2	ENSFALP00000002643	ENSFALP00000004756	Troponin I1, slow skeletal type.	Troponin C2, fast skeletal type.	0.960
TNNI1	TNNI2	ENSFALP00000002643	ENSFALP00000012205	Troponin I1, slow skeletal type.	Troponin I2, fast skeletal type.	0.747
TNNI1	TNNT3	ENSFALP00000002643	ENSFALP00000012145	Troponin I1, slow skeletal type.	Troponin T3, fast skeletal type.	0.916
TNNI2	TNNC1	ENSFALP00000012205	ENSFALP00000009319	Troponin I2, fast skeletal type.	Troponin C1, slow skeletal and cardiac type.	0.970
TNNI2	TNNC2	ENSFALP00000012205	ENSFALP00000004756	Troponin I2, fast skeletal type.	Troponin C2, fast skeletal type.	0.997
TNNI2	TNNI1	ENSFALP00000012205	ENSFALP00000002643	Troponin I2, fast skeletal type.	Troponin I1, slow skeletal type.	0.747
TNNI2	TNNT3	ENSFALP00000012205	ENSFALP00000012145	Troponin I2, fast skeletal type.	Troponin T3, fast skeletal type.	0.950
TNNT3	TNNC1	ENSFALP00000012145	ENSFALP00000009319	Troponin T3, fast skeletal type.	Troponin C1, slow skeletal and cardiac type.	0.824
TNNT3	TNNC2	ENSFALP00000012145	ENSFALP00000004756	Troponin T3, fast skeletal type.	Troponin C2, fast skeletal type.	0.960
TNNT3	TNNI1	ENSFALP00000012145	ENSFALP00000002643	Troponin T3, fast skeletal type.	Troponin I1, slow skeletal type.	0.916
TNNT3	TNNI2	ENSFALP00000012145	ENSFALP00000012205	Troponin T3, fast skeletal type.	Troponin I2, fast skeletal type.	0.950