STRINGSTRING
CSRP1 CSRP1 NEXN NEXN CAPN3 CAPN3 TMUB1 TMUB1 CSRP2 CSRP2 SYNM SYNM DAG1 DAG1 SGCG SGCG SGCB SGCB SGCD SGCD CSRP3 CSRP3 U3JMR6_FICAL U3JMR6_FICAL SGCZ SGCZ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CSRP1Cysteine and glycine rich protein 1. (192 aa)
NEXNNexilin F-actin binding protein. (674 aa)
CAPN3Calpain 3; Belongs to the peptidase C2 family. (809 aa)
TMUB1Transmembrane and ubiquitin like domain containing 1. (123 aa)
CSRP2Cysteine and glycine rich protein 2. (228 aa)
SYNMSynemin; Belongs to the intermediate filament family. (1519 aa)
DAG1Dystroglycan 1. (897 aa)
SGCGSarcoglycan gamma. (291 aa)
SGCBSarcoglycan beta. (319 aa)
SGCDSarcoglycan delta. (231 aa)
CSRP3Cysteine and glycine rich protein 3. (196 aa)
U3JMR6_FICALPeptidase S72 domain-containing protein. (694 aa)
SGCZSarcoglycan zeta. (309 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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