97 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101809398	Uncharacterized protein. (191 aa)
	FMNL3	Formin like 3. (1045 aa)
	LPAR1	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (369 aa)
	PLXNA2	Plexin A2. (1961 aa)
	RHOC	Uncharacterized protein. (197 aa)
	RND2	Rho family GTPase 2. (195 aa)
	ZMPSTE24	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (467 aa)
	RHOBTB2	Rho related BTB domain containing 2. (754 aa)
	PALMD	Palmdelphin. (454 aa)
	GNA13	G protein subunit alpha 13. (291 aa)
	SEMA4A	Semaphorin 4A; Belongs to the semaphorin family. (707 aa)
	PHIP	Pleckstrin homology domain interacting protein. (1879 aa)
	FGR	Tyrosine-protein kinase. (543 aa)
	RHOU	Ras homolog family member U. (184 aa)
	RHOJ	Ras homolog family member J. (214 aa)
	KIT	Mast/stem cell growth factor receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (955 aa)
	FBLIM1	Filamin binding LIM protein 1. (373 aa)
	KDR	Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1345 aa)
	PTK2B	Protein tyrosine kinase 2 beta; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1023 aa)
	VIL1	Villin 1. (860 aa)
	BRWD3	Bromodomain and WD repeat domain containing 3. (1667 aa)
	MSN	Moesin. (569 aa)
	LOC101811337	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2040 aa)
	FAM171B	Family with sequence similarity 171 member B. (754 aa)
	CDC42SE2	CDC42 small effector 2. (84 aa)
	BRWD1	Bromodomain and WD repeat domain containing 1. (2302 aa)
	F2	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. (608 aa)
	EPB41L3	Erythrocyte membrane protein band 4.1 like 3. (1154 aa)
	PARVB	Parvin beta. (327 aa)
	PRAG1	PEAK1 related, kinase-activating pseudokinase 1. (1365 aa)
	BAMBI	BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family. (261 aa)
	CFDP1	Craniofacial development protein 1; May play a role during embryogenesis. (287 aa)
	MYO10	Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2049 aa)
	FAM171A1	Family with sequence similarity 171 member A1. (771 aa)
	PLXNA1	Plexin A1. (1894 aa)
	CSF1R	Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (968 aa)
	DNMBP	Dynamin binding protein. (1514 aa)
	WASF3	WASP family member 3. (488 aa)
	RHOA	Ras homolog family member A. (172 aa)
	RDX	Radixin. (594 aa)
	U3K2K1_FICAL	Uncharacterized protein. (620 aa)
	FGD4	FYVE, RhoGEF and PH domain containing 4. (908 aa)
	RHOF	Ras homolog family member F, filopodia associated. (215 aa)
	FMNL1	Uncharacterized protein. (459 aa)
	U3K4R0_FICAL	GBD/FH3 domain-containing protein. (130 aa)
	PLXNB2	Plexin B2. (1840 aa)
	U3K5R9_FICAL	Uncharacterized protein. (145 aa)
	HEXB	Beta-hexosaminidase. (516 aa)
	SLC26A5	Solute carrier family 26 member 5. (740 aa)
	ARHGAP35	Rho GTPase activating protein 35. (1063 aa)
	SEMA3E	Semaphorin 3E; Belongs to the semaphorin family. (738 aa)
	PARVA	Parvin alpha. (336 aa)
	PLXNC1	Plexin C1. (1451 aa)
	U3K8D0_FICAL	Uncharacterized protein. (501 aa)
	FYN	Tyrosine-protein kinase. (534 aa)
	VEGFA	Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family. (177 aa)
	LOC101815017	CRIB domain-containing protein. (76 aa)
	BVES	Blood vessel epicardial substance. (359 aa)
	ARHGAP18	Rho GTPase activating protein 18. (622 aa)
	RAC3	Rac family small GTPase 3. (180 aa)
	RHOBTB3	Rho related BTB domain containing 3. (611 aa)
	PLXNA4	Plexin A4. (1600 aa)
	U3KBJ1_FICAL	Plexin_cytopl domain-containing protein. (332 aa)
	MKLN1	Muskelin 1. (769 aa)
	RHOD	Ras homolog family member D. (209 aa)
	BAIAP2	BAI1 associated protein 2. (502 aa)
	EZR	Ezrin. (648 aa)
	PLXNB1	Plexin B1. (2207 aa)
	ANXA1	Annexin. (372 aa)
	FN1	Fibronectin 1. (2307 aa)
	CDC42EP1	CDC42 effector protein 1. (429 aa)
	RAC2	Rac family small GTPase 2. (192 aa)
	CDC42EP4	CDC42 effector protein 4. (340 aa)
	RHOQ	Ras homolog family member Q. (218 aa)
	RHOBTB1	Rho related BTB domain containing 1. (694 aa)
	CFAP410	Cilia and flagella associated protein 410. (264 aa)
	WDPCP	WD repeat containing planar cell polarity effector. (712 aa)
	PLXND1	Plexin D1. (1620 aa)
	LOC101812529	C-C motif chemokine. (94 aa)
	U3KH96_FICAL	Uncharacterized protein. (338 aa)
	ARHGEF18	Uncharacterized protein. (1122 aa)
	RND3	Rho family GTPase 3. (244 aa)
	GNA12	G protein subunit alpha 12. (340 aa)
	PALM	Paralemmin. (461 aa)
	FMNL2	Formin like 2. (1029 aa)
	PRPF40A	Pre-mRNA processing factor 40 homolog A. (882 aa)
	RAC1	Rac family small GTPase 1. (192 aa)
	P2RY1	Purinergic receptor P2Y1; Belongs to the G-protein coupled receptor 1 family. (363 aa)
	ERMN	Uncharacterized protein. (89 aa)
	RHOG	Uncharacterized protein. (191 aa)
	RHOG-2	Ras homolog family member G. (191 aa)
	RHOB	Ras homolog family member B. (196 aa)
	U3KL04_FICAL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (316 aa)
	U3KL42_FICAL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (294 aa)
	RHOH	Ras homolog family member H. (191 aa)
	CDC42EP3	CDC42 effector protein 3. (254 aa)
	C15orf62	Chromosome 15 open reading frame 62. (174 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANXA1	F2	ENSFALP00000013381	ENSFALP00000006551	Annexin.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.734
ARHGAP35	FGR	ENSFALP00000010892	ENSFALP00000002928	Rho GTPase activating protein 35.	Tyrosine-protein kinase.	0.531
ARHGAP35	FYN	ENSFALP00000010892	ENSFALP00000011423	Rho GTPase activating protein 35.	Tyrosine-protein kinase.	0.531
ARHGAP35	LOC101809398	ENSFALP00000010892	ENSFALP00000015784	Rho GTPase activating protein 35.	Uncharacterized protein.	0.403
ARHGAP35	PLXNB1	ENSFALP00000010892	ENSFALP00000013262	Rho GTPase activating protein 35.	Plexin B1.	0.429
ARHGAP35	PLXNB2	ENSFALP00000010892	ENSFALP00000010228	Rho GTPase activating protein 35.	Plexin B2.	0.429
ARHGAP35	RAC1	ENSFALP00000010892	ENSFALP00000014595	Rho GTPase activating protein 35.	Rac family small GTPase 1.	0.409
ARHGAP35	RAC2	ENSFALP00000010892	ENSFALP00000013466	Rho GTPase activating protein 35.	Rac family small GTPase 2.	0.409
ARHGAP35	RAC3	ENSFALP00000010892	ENSFALP00000012277	Rho GTPase activating protein 35.	Rac family small GTPase 3.	0.409
ARHGAP35	RHOA	ENSFALP00000010892	ENSFALP00000009139	Rho GTPase activating protein 35.	Ras homolog family member A.	0.978
ARHGAP35	RHOB	ENSFALP00000010892	ENSFALP00000015478	Rho GTPase activating protein 35.	Ras homolog family member B.	0.795
ARHGAP35	RHOC	ENSFALP00000010892	ENSFALP00000000761	Rho GTPase activating protein 35.	Uncharacterized protein.	0.795
ARHGAP35	RHOD	ENSFALP00000010892	ENSFALP00000012943	Rho GTPase activating protein 35.	Ras homolog family member D.	0.619
ARHGAP35	RHOF	ENSFALP00000010892	ENSFALP00000009531	Rho GTPase activating protein 35.	Ras homolog family member F, filopodia associated.	0.619
ARHGAP35	RHOG	ENSFALP00000010892	ENSFALP00000015367	Rho GTPase activating protein 35.	Uncharacterized protein.	0.403
ARHGAP35	RHOG-2	ENSFALP00000010892	ENSFALP00000015377	Rho GTPase activating protein 35.	Ras homolog family member G.	0.403
ARHGAP35	RHOJ	ENSFALP00000010892	ENSFALP00000003498	Rho GTPase activating protein 35.	Ras homolog family member J.	0.440
ARHGAP35	RHOQ	ENSFALP00000010892	ENSFALP00000013477	Rho GTPase activating protein 35.	Ras homolog family member Q.	0.440
ARHGAP35	RND2	ENSFALP00000010892	ENSFALP00000000817	Rho GTPase activating protein 35.	Rho family GTPase 2.	0.750
ARHGAP35	RND3	ENSFALP00000010892	ENSFALP00000014471	Rho GTPase activating protein 35.	Rho family GTPase 3.	0.857