STRINGSTRING
SRF SRF FZD7 FZD7 FZD5 FZD5 GPR18 GPR18 GPR183 GPR183 RHOH RHOH NRARP NRARP RAG1 RAG1 RAG2 RAG2 CCR9 CCR9 LFNG LFNG CARD11 CARD11 ZAP70 ZAP70 CD83 CD83 CHD9 CHD9 BCL2 BCL2 ANXA1 ANXA1 LEPR LEPR RORA RORA CCR6 CCR6 LEF1 LEF1 CTNNB1 CTNNB1 HLX HLX SASH3 SASH3 ATG5 ATG5 THEMIS THEMIS TRAF3IP2 TRAF3IP2 TOX TOX MTOR MTOR CD8A CD8A IL6 IL6 EOMES EOMES IL12B IL12B IL7 IL7 NKX2-3 NKX2-3 IL21 IL21 ABL2 ABL2 CD74 CD74 TCF7 TCF7 U3JZ18_FICAL U3JZ18_FICAL FZD8 FZD8 RSAD2 RSAD2 PTPN2 PTPN2 FOXN1 FOXN1 BATF BATF DLL4 DLL4 LOC101820502 LOC101820502 CD3E CD3E CHD7 CHD7 TNFSF8 TNFSF8 RABL3 RABL3 RIPK2 RIPK2 IL15 IL15 CD4 CD4 U3JP27_FICAL U3JP27_FICAL KIT KIT EGR1 EGR1 ZBTB1 ZBTB1 JAG2 JAG2 RC3H1 RC3H1 SP3 SP3 PTPRC PTPRC SEMA4A SEMA4A BCL11B BCL11B IL7R IL7R PTGER4 PTGER4 RC3H2 RC3H2 PKNOX1 PKNOX1 GATA3 GATA3 GPR89B GPR89B TSC1 TSC1 ABL1 ABL1 FADD FADD IL6R IL6R LCK LCK IKZF3 IKZF3 SOX13 SOX13 CCR7 CCR7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SRFSerum response factor. (337 aa)
FZD7Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family. (554 aa)
FZD5Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (555 aa)
GPR18G protein-coupled receptor 18; Belongs to the G-protein coupled receptor 1 family. (318 aa)
GPR183G protein-coupled receptor 183; Belongs to the G-protein coupled receptor 1 family. (355 aa)
RHOHRas homolog family member H. (191 aa)
NRARPNOTCH regulated ankyrin repeat protein. (117 aa)
RAG1V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1040 aa)
RAG2Recombination activating 2. (528 aa)
CCR9C-C motif chemokine receptor 9; Belongs to the G-protein coupled receptor 1 family. (345 aa)
LFNGBeta-1,3-N-acetylglucosaminyltransferase. (320 aa)
CARD11Caspase recruitment domain family member 11. (1166 aa)
ZAP70Tyrosine-protein kinase. (614 aa)
CD83CD83 molecule. (199 aa)
CHD9Chromodomain helicase DNA binding protein 9. (2420 aa)
BCL2BCL2 apoptosis regulator. (239 aa)
ANXA1Annexin. (372 aa)
LEPRLeptin receptor. (1123 aa)
RORARAR related orphan receptor A. (465 aa)
CCR6C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family. (384 aa)
LEF1Lymphoid enhancer binding factor 1. (331 aa)
CTNNB1Catenin beta 1. (781 aa)
HLXH2.0 like homeobox. (175 aa)
SASH3SAM and SH3 domain containing 3. (376 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
THEMISThymocyte selection associated. (563 aa)
TRAF3IP2SEFIR domain-containing protein. (538 aa)
TOXThymocyte selection associated high mobility group box. (525 aa)
MTORSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2523 aa)
CD8ACD8a molecule. (229 aa)
IL6Interleukin 6. (165 aa)
EOMESEomesodermin. (440 aa)
IL12BInterleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (284 aa)
IL7Interleukin 7. (178 aa)
NKX2-3NK2 homeobox 3. (309 aa)
IL21Uncharacterized protein. (100 aa)
ABL2Tyrosine-protein kinase. (1123 aa)
CD74CD74 molecule. (289 aa)
TCF7Transcription factor 7. (473 aa)
U3JZ18_FICALUncharacterized protein. (570 aa)
FZD8Frizzled class receptor 8; Belongs to the G-protein coupled receptor Fz/Smo family. (555 aa)
RSAD2Radical S-adenosyl methionine domain containing 2. (346 aa)
PTPN2Tyrosine-protein phosphatase non-receptor type. (375 aa)
FOXN1Forkhead box N1. (653 aa)
BATFBasic leucine zipper ATF-like transcription factor. (125 aa)
DLL4Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (683 aa)
LOC101820502Ig_4 domain-containing protein. (171 aa)
CD3ECD3e molecule. (197 aa)
CHD7Chromodomain helicase DNA binding protein 7. (3012 aa)
TNFSF8TNF superfamily member 8; Belongs to the tumor necrosis factor family. (235 aa)
RABL3RAB, member of RAS oncogene family like 3. (236 aa)
RIPK2Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. (573 aa)
IL15Interleukin; Belongs to the IL-15/IL-21 family. (184 aa)
CD4Uncharacterized protein. (487 aa)
U3JP27_FICALUncharacterized protein. (343 aa)
KITMast/stem cell growth factor receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (955 aa)
EGR1Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family. (583 aa)
ZBTB1Zinc finger and BTB domain containing 1. (642 aa)
JAG2Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1238 aa)
RC3H1Ring finger and CCCH-type domains 1. (1140 aa)
SP3Sp3 transcription factor. (690 aa)
PTPRCProtein tyrosine phosphatase receptor type C. (1201 aa)
SEMA4ASemaphorin 4A; Belongs to the semaphorin family. (707 aa)
BCL11BBAF chromatin remodeling complex subunit BCL11B. (787 aa)
IL7RInterleukin 7 receptor. (459 aa)
PTGER4Prostaglandin E receptor 4; Belongs to the G-protein coupled receptor 1 family. (474 aa)
RC3H2Ring finger and CCCH-type domains 2. (1191 aa)
PKNOX1PBX/knotted 1 homeobox 1. (436 aa)
GATA3GATA binding protein 3. (444 aa)
GPR89BUncharacterized protein. (455 aa)
TSC1TSC complex subunit 1. (1153 aa)
ABL1Tyrosine-protein kinase. (1127 aa)
FADDFas associated via death domain. (227 aa)
IL6RInterleukin 6 receptor. (457 aa)
LCKLCK proto-oncogene, Src family tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. (506 aa)
IKZF3IKAROS family zinc finger 3. (503 aa)
SOX13SRY-box transcription factor 13. (611 aa)
CCR7C-C motif chemokine receptor 7; Belongs to the G-protein coupled receptor 1 family. (374 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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