62 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POMC	Proopiomelanocortin. (224 aa)
	SYT11	Synaptotagmin 11. (442 aa)
	PTPRC	Protein tyrosine phosphatase receptor type C. (1201 aa)
	DICER1	Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. (1921 aa)
	CARD9	Caspase recruitment domain family member 9. (542 aa)
	U3JG88_FICAL	SLAM domain-containing protein. (68 aa)
	CD2	IG domain-containing protein. (312 aa)
	FADD	Fas associated via death domain. (227 aa)
	DDX58	DExD/H-box helicase 58. (888 aa)
	LOC101818819	Uncharacterized protein. (511 aa)
	ZC3H12A	Zinc finger CCCH-type containing 12A. (602 aa)
	ABCC8	ATP binding cassette subfamily C member 8. (1473 aa)
	MAPKAPK2	MAPK activated protein kinase 2; Belongs to the protein kinase superfamily. (361 aa)
	IL10	Interleukin 10. (182 aa)
	CD34	CD34 molecule. (374 aa)
	MAVS	CARD_2 domain-containing protein. (619 aa)
	GPR18	G protein-coupled receptor 18; Belongs to the G-protein coupled receptor 1 family. (318 aa)
	LOC101810757	Uncharacterized protein. (450 aa)
	VSIR	Ig-like domain-containing protein. (310 aa)
	RIPK1	Receptor interacting serine/threonine kinase 1. (705 aa)
	ARFGEF2	ADP ribosylation factor guanine nucleotide exchange factor 2. (1756 aa)
	IFNGR1	Interferon gamma receptor 1. (405 aa)
	TNFAIP3	TNF alpha induced protein 3. (809 aa)
	CHRNA7	Uncharacterized protein. (443 aa)
	AKAP12	A-kinase anchoring protein 12. (1889 aa)
	APP	Amyloid beta precursor protein. (738 aa)
	TLR3	Toll like receptor 3; Belongs to the Toll-like receptor family. (896 aa)
	SASH3	SAM and SH3 domain containing 3. (376 aa)
	CACTIN	Cactin, spliceosome C complex subunit. (726 aa)
	NR1H4	Nuclear receptor subfamily 1 group H member 4. (473 aa)
	SETD4	SET domain containing 4. (444 aa)
	LRRK2	Leucine rich repeat kinase 2. (2450 aa)
	SPON2	Spondin 2. (330 aa)
	ERRFI1	ERBB receptor feedback inhibitor 1. (464 aa)
	CCL19-2	SCY domain-containing protein. (96 aa)
	IL6	Interleukin 6. (165 aa)
	GPNMB	Glycoprotein nmb. (646 aa)
	HSPB1	Heat shock protein family B (small) member 1; Belongs to the small heat shock protein (HSP20) family. (194 aa)
	NOD1	Nucleotide binding oligomerization domain containing 1. (950 aa)
	IL12B	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (284 aa)
	LY96	Lymphocyte antigen 96. (155 aa)
	GHSR	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family. (352 aa)
	U3JZ18_FICAL	Uncharacterized protein. (570 aa)
	CIDEA	Cell death inducing DFFA like effector a. (218 aa)
	C1QTNF4	C1q and TNF related 4. (384 aa)
	ZBTB20	Zinc finger and BTB domain containing 20. (668 aa)
	RASGRP1	RAS guanyl releasing protein 1. (671 aa)
	U3JSV4_FICAL	Uncharacterized protein. (495 aa)
	PSEN1	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (467 aa)
	THBS1	Thrombospondin 1. (1136 aa)
	U3JRT2_FICAL	Uncharacterized protein. (451 aa)
	BPI	Uncharacterized protein. (479 aa)
	RIPK2	Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. (573 aa)
	TIRAP	TIR domain containing adaptor protein. (237 aa)
	PTPN6	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (608 aa)
	NLRC3	NLR family CARD domain containing 3. (1059 aa)
	ADIPOQ	Adiponectin, C1Q and collagen domain containing. (246 aa)
	ILRUN	Inflammation and lipid regulator with UBA-like and NBR1-like domains. (245 aa)
	CYBA	Cytochrome b-245 alpha chain. (86 aa)
	GAS6	Growth arrest specific 6. (634 aa)
	UBE2J1	Ubiquitin conjugating enzyme E2 J1. (315 aa)
	DHX9	DExH-box helicase 9. (1209 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADIPOQ	CIDEA	ENSFALP00000004176	ENSFALP00000006716	Adiponectin, C1Q and collagen domain containing.	Cell death inducing DFFA like effector a.	0.419
ADIPOQ	IL10	ENSFALP00000004176	ENSFALP00000000578	Adiponectin, C1Q and collagen domain containing.	Interleukin 10.	0.459
ADIPOQ	IL6	ENSFALP00000004176	ENSFALP00000010154	Adiponectin, C1Q and collagen domain containing.	Interleukin 6.	0.522
APP	CHRNA7	ENSFALP00000012506	ENSFALP00000012902	Amyloid beta precursor protein.	Uncharacterized protein.	0.409
APP	GHSR	ENSFALP00000012506	ENSFALP00000008817	Amyloid beta precursor protein.	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.	0.518
APP	LOC101818819	ENSFALP00000012506	ENSFALP00000001074	Amyloid beta precursor protein.	Uncharacterized protein.	0.409
APP	PSEN1	ENSFALP00000012506	ENSFALP00000005698	Amyloid beta precursor protein.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.959
APP	SYT11	ENSFALP00000012506	ENSFALP00000002877	Amyloid beta precursor protein.	Synaptotagmin 11.	0.462
BPI	LOC101810757	ENSFALP00000005458	ENSFALP00000015653	Uncharacterized protein.	Uncharacterized protein.	0.401
BPI	LY96	ENSFALP00000005458	ENSFALP00000008925	Uncharacterized protein.	Lymphocyte antigen 96.	0.456
CARD9	DDX58	ENSFALP00000001835	ENSFALP00000001210	Caspase recruitment domain family member 9.	DExD/H-box helicase 58.	0.475
CARD9	NOD1	ENSFALP00000001835	ENSFALP00000009501	Caspase recruitment domain family member 9.	Nucleotide binding oligomerization domain containing 1.	0.580
CARD9	RIPK2	ENSFALP00000001835	ENSFALP00000005363	Caspase recruitment domain family member 9.	Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains.	0.930
CARD9	U3JZ18_FICAL	ENSFALP00000001835	ENSFALP00000008022	Caspase recruitment domain family member 9.	Uncharacterized protein.	0.930
CD2	PTPRC	ENSFALP00000001587	ENSFALP00000002847	IG domain-containing protein.	Protein tyrosine phosphatase receptor type C.	0.500
CD2	U3JG88_FICAL	ENSFALP00000001587	ENSFALP00000001792	IG domain-containing protein.	SLAM domain-containing protein.	0.522
CD34	IL6	ENSFALP00000000538	ENSFALP00000010154	CD34 molecule.	Interleukin 6.	0.483
CD34	LOC101810757	ENSFALP00000000538	ENSFALP00000015653	CD34 molecule.	Uncharacterized protein.	0.400
CD34	PTPRC	ENSFALP00000000538	ENSFALP00000002847	CD34 molecule.	Protein tyrosine phosphatase receptor type C.	0.523
CD34	U3JG88_FICAL	ENSFALP00000000538	ENSFALP00000001792	CD34 molecule.	SLAM domain-containing protein.	0.472