23 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DAG1	Dystroglycan 1. (897 aa)
	CEP57L1	Centrosomal protein 57 like 1. (231 aa)
	FGFR1OP	FGFR1 oncogene partner. (350 aa)
	CLASP2	Uncharacterized protein. (1523 aa)
	BICD2	BICD cargo adaptor 2. (903 aa)
	CLASP1	Cytoplasmic linker associated protein 1. (1567 aa)
	PEX14	Peroxisomal biogenesis factor 14. (359 aa)
	CEP350	Centrosomal protein 350. (3108 aa)
	CEP57	Centrosomal protein 57. (504 aa)
	KIF3A	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (665 aa)
	FOPNL	FGFR1OP N-terminal like. (177 aa)
	NIN	Ninein. (2080 aa)
	U3JGD8_FICAL	Uncharacterized protein. (138 aa)
	BCCIP	Protein BCCIP homolog; Belongs to the BCP1 family. (308 aa)
	PCM1	Pericentriolar material 1. (2039 aa)
	BBS4	Bardet-Biedl syndrome 4. (538 aa)
	BICD1	BICD cargo adaptor 1. (978 aa)
	CEP19	Centrosomal protein 19. (211 aa)
	GCC2	GRIP and coiled-coil domain containing 2. (1675 aa)
	U3JMR6_FICAL	Peptidase S72 domain-containing protein. (694 aa)
	HOOK3	Hook microtubule tethering protein 3. (764 aa)
	U3JI26_FICAL	Uncharacterized protein. (306 aa)
	U3JI25_FICAL	Uncharacterized protein. (186 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS4	KIF3A	ENSFALP00000009951	ENSFALP00000014048	Bardet-Biedl syndrome 4.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.633
BBS4	PCM1	ENSFALP00000009951	ENSFALP00000011783	Bardet-Biedl syndrome 4.	Pericentriolar material 1.	0.776
BICD1	HOOK3	ENSFALP00000009409	ENSFALP00000005353	BICD cargo adaptor 1.	Hook microtubule tethering protein 3.	0.459
BICD2	HOOK3	ENSFALP00000007368	ENSFALP00000005353	BICD cargo adaptor 2.	Hook microtubule tethering protein 3.	0.728
CEP19	CEP350	ENSFALP00000003246	ENSFALP00000008471	Centrosomal protein 19.	Centrosomal protein 350.	0.624
CEP19	FGFR1OP	ENSFALP00000003246	ENSFALP00000012862	Centrosomal protein 19.	FGFR1 oncogene partner.	0.677
CEP19	FOPNL	ENSFALP00000003246	ENSFALP00000014668	Centrosomal protein 19.	FGFR1OP N-terminal like.	0.461
CEP350	CEP19	ENSFALP00000008471	ENSFALP00000003246	Centrosomal protein 350.	Centrosomal protein 19.	0.624
CEP350	FGFR1OP	ENSFALP00000008471	ENSFALP00000012862	Centrosomal protein 350.	FGFR1 oncogene partner.	0.876
CEP350	FOPNL	ENSFALP00000008471	ENSFALP00000014668	Centrosomal protein 350.	FGFR1OP N-terminal like.	0.510
FGFR1OP	CEP19	ENSFALP00000012862	ENSFALP00000003246	FGFR1 oncogene partner.	Centrosomal protein 19.	0.677
FGFR1OP	CEP350	ENSFALP00000012862	ENSFALP00000008471	FGFR1 oncogene partner.	Centrosomal protein 350.	0.876
FOPNL	CEP19	ENSFALP00000014668	ENSFALP00000003246	FGFR1OP N-terminal like.	Centrosomal protein 19.	0.461
FOPNL	CEP350	ENSFALP00000014668	ENSFALP00000008471	FGFR1OP N-terminal like.	Centrosomal protein 350.	0.510
FOPNL	PCM1	ENSFALP00000014668	ENSFALP00000011783	FGFR1OP N-terminal like.	Pericentriolar material 1.	0.416
HOOK3	BICD1	ENSFALP00000005353	ENSFALP00000009409	Hook microtubule tethering protein 3.	BICD cargo adaptor 1.	0.459
HOOK3	BICD2	ENSFALP00000005353	ENSFALP00000007368	Hook microtubule tethering protein 3.	BICD cargo adaptor 2.	0.728
HOOK3	PCM1	ENSFALP00000005353	ENSFALP00000011783	Hook microtubule tethering protein 3.	Pericentriolar material 1.	0.492
KIF3A	BBS4	ENSFALP00000014048	ENSFALP00000009951	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Bardet-Biedl syndrome 4.	0.633
NIN	PCM1	ENSFALP00000001934	ENSFALP00000011783	Ninein.	Pericentriolar material 1.	0.485