14 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PRNP	Prion protein; Belongs to the prion family. (231 aa)
	CDH8	Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins. (799 aa)
	U3KAJ6_FICAL	Uncharacterized protein. (880 aa)
	LGI4	LRRCT domain-containing protein. (488 aa)
	EGFLAM	EGF like, fibronectin type III and laminin G domains. (964 aa)
	LAMA2	Uncharacterized protein. (1254 aa)
	U3KAQ1_FICAL	Laminin_I domain-containing protein. (216 aa)
	U3KAQ8_FICAL	Uncharacterized protein. (94 aa)
	LAMB2	Laminin subunit beta 2. (1642 aa)
	LGI1	Leucine rich glioma inactivated 1. (544 aa)
	LOC101815720	Uncharacterized protein; Belongs to the peptidase S1 family. (822 aa)
	LAMA1	Laminin subunit alpha 1. (3039 aa)
	PRSS12	Serine protease 12; Belongs to the peptidase S1 family. (711 aa)
	LAMA4	Laminin subunit alpha 4. (1827 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LAMA1	LAMB2	ENSFALP00000006603	ENSFALP00000013601	Laminin subunit alpha 1.	Laminin subunit beta 2.	0.838
LAMA2	LAMB2	ENSFALP00000012082	ENSFALP00000013601	Uncharacterized protein.	Laminin subunit beta 2.	0.683
LAMA2	U3KAJ6_FICAL	ENSFALP00000012082	ENSFALP00000012050	Uncharacterized protein.	Uncharacterized protein.	0.899
LAMA2	U3KAQ1_FICAL	ENSFALP00000012082	ENSFALP00000012105	Uncharacterized protein.	Laminin_I domain-containing protein.	0.923
LAMA4	LAMB2	ENSFALP00000011446	ENSFALP00000013601	Laminin subunit alpha 4.	Laminin subunit beta 2.	0.711
LAMB2	LAMA1	ENSFALP00000013601	ENSFALP00000006603	Laminin subunit beta 2.	Laminin subunit alpha 1.	0.838
LAMB2	LAMA2	ENSFALP00000013601	ENSFALP00000012082	Laminin subunit beta 2.	Uncharacterized protein.	0.683
LAMB2	LAMA4	ENSFALP00000013601	ENSFALP00000011446	Laminin subunit beta 2.	Laminin subunit alpha 4.	0.711
LAMB2	U3KAJ6_FICAL	ENSFALP00000013601	ENSFALP00000012050	Laminin subunit beta 2.	Uncharacterized protein.	0.683
LAMB2	U3KAQ1_FICAL	ENSFALP00000013601	ENSFALP00000012105	Laminin subunit beta 2.	Laminin_I domain-containing protein.	0.683
LAMB2	U3KAQ8_FICAL	ENSFALP00000013601	ENSFALP00000012112	Laminin subunit beta 2.	Uncharacterized protein.	0.683
U3KAJ6_FICAL	LAMA2	ENSFALP00000012050	ENSFALP00000012082	Uncharacterized protein.	Uncharacterized protein.	0.899
U3KAJ6_FICAL	LAMB2	ENSFALP00000012050	ENSFALP00000013601	Uncharacterized protein.	Laminin subunit beta 2.	0.683
U3KAJ6_FICAL	U3KAQ1_FICAL	ENSFALP00000012050	ENSFALP00000012105	Uncharacterized protein.	Laminin_I domain-containing protein.	0.815
U3KAJ6_FICAL	U3KAQ8_FICAL	ENSFALP00000012050	ENSFALP00000012112	Uncharacterized protein.	Uncharacterized protein.	0.713
U3KAQ1_FICAL	LAMA2	ENSFALP00000012105	ENSFALP00000012082	Laminin_I domain-containing protein.	Uncharacterized protein.	0.923
U3KAQ1_FICAL	LAMB2	ENSFALP00000012105	ENSFALP00000013601	Laminin_I domain-containing protein.	Laminin subunit beta 2.	0.683
U3KAQ1_FICAL	U3KAJ6_FICAL	ENSFALP00000012105	ENSFALP00000012050	Laminin_I domain-containing protein.	Uncharacterized protein.	0.815
U3KAQ1_FICAL	U3KAQ8_FICAL	ENSFALP00000012105	ENSFALP00000012112	Laminin_I domain-containing protein.	Uncharacterized protein.	0.903
U3KAQ8_FICAL	LAMB2	ENSFALP00000012112	ENSFALP00000013601	Uncharacterized protein.	Laminin subunit beta 2.	0.683