36 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CLDN34	Claudin 34. (209 aa)
	RHOC	Uncharacterized protein. (197 aa)
	TBCD	Tubulin folding cofactor D. (1205 aa)
	SRF	Serum response factor. (337 aa)
	PECAM1	Platelet and endothelial cell adhesion molecule 1. (669 aa)
	U3JI01_FICAL	Uncharacterized protein. (267 aa)
	PAK2	Non-specific serine/threonine protein kinase. (521 aa)
	LOC101811155	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (225 aa)
	POF1B	POF1B actin binding protein. (491 aa)
	CLDN10	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (245 aa)
	PDCD6IP	BRO1 domain-containing protein. (880 aa)
	ESAM	Endothelial cell adhesion molecule. (367 aa)
	WNT11	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (354 aa)
	DLG5	Discs large MAGUK scaffold protein 5; Belongs to the MAGUK family. (1936 aa)
	VCL	Vinculin. (1168 aa)
	PARD3	Par-3 family cell polarity regulator. (1277 aa)
	CLDN16	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (239 aa)
	CLDN1	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (211 aa)
	FRMPD2	FERM and PDZ domain containing 2. (1330 aa)
	ECT2	Epithelial cell transforming 2. (986 aa)
	RHOA	Ras homolog family member A. (172 aa)
	U3K3B2_FICAL	MARVEL domain-containing protein. (182 aa)
	U3K6W6_FICAL	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (242 aa)
	CLDN19	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (210 aa)
	CLDN2	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (231 aa)
	AFDN	Afadin, adherens junction formation factor. (1746 aa)
	MARVELD2	MARVEL domain containing 2. (508 aa)
	LOC101817916	MARVEL domain-containing protein. (329 aa)
	CLDN18	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (263 aa)
	CLDN4	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (215 aa)
	MICALL2	MICAL like 2. (866 aa)
	CLDN23	Claudin 23. (188 aa)
	CLDN3	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (215 aa)
	CLDN5	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (216 aa)
	LOC101817656	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (217 aa)
	CLDN20	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (219 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFDN	MARVELD2	ENSFALP00000012891	ENSFALP00000012896	Afadin, adherens junction formation factor.	MARVEL domain containing 2.	0.418
AFDN	RHOA	ENSFALP00000012891	ENSFALP00000009139	Afadin, adherens junction formation factor.	Ras homolog family member A.	0.402
AFDN	RHOC	ENSFALP00000012891	ENSFALP00000000761	Afadin, adherens junction formation factor.	Uncharacterized protein.	0.402
AFDN	VCL	ENSFALP00000012891	ENSFALP00000007333	Afadin, adherens junction formation factor.	Vinculin.	0.709
CLDN1	CLDN16	ENSFALP00000007692	ENSFALP00000007674	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.746
CLDN1	CLDN18	ENSFALP00000007692	ENSFALP00000013968	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.670
CLDN1	CLDN19	ENSFALP00000007692	ENSFALP00000010773	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.670
CLDN1	CLDN2	ENSFALP00000007692	ENSFALP00000011700	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.704
CLDN1	CLDN20	ENSFALP00000007692	ENSFALP00000015557	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.666
CLDN1	CLDN23	ENSFALP00000007692	ENSFALP00000014891	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin 23.	0.708
CLDN1	CLDN3	ENSFALP00000007692	ENSFALP00000014896	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.720
CLDN1	CLDN34	ENSFALP00000007692	ENSFALP00000015816	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin 34.	0.675
CLDN1	CLDN4	ENSFALP00000007692	ENSFALP00000014366	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.768
CLDN1	CLDN5	ENSFALP00000007692	ENSFALP00000015122	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.749
CLDN1	LOC101811155	ENSFALP00000007692	ENSFALP00000003803	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.672
CLDN1	LOC101817656	ENSFALP00000007692	ENSFALP00000015216	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.669
CLDN1	MARVELD2	ENSFALP00000007692	ENSFALP00000012896	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	MARVEL domain containing 2.	0.517
CLDN1	PARD3	ENSFALP00000007692	ENSFALP00000007382	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Par-3 family cell polarity regulator.	0.900
CLDN16	CLDN1	ENSFALP00000007674	ENSFALP00000007692	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.746
CLDN16	CLDN18	ENSFALP00000007674	ENSFALP00000013968	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.746