(11 nodes) Nuclear pore nuclear basket network (Ficedula albicollis)

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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gene neighborhood

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textmining

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protein homology

Your Input:
	MAD2L1	Mitotic arrest deficient 2 like 1. (206 aa)
	MAD1L1	Mitotic arrest deficient 1 like 1. (717 aa)
	NUP153	Nucleoporin 153. (1390 aa)
	NUP35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (324 aa)
	NUP98	Nucleoporin 98. (1702 aa)
	CETN3	Centrin 3. (161 aa)
	ENY2	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (96 aa)
	MCM3AP	Minichromosome maintenance complex component 3 associated protein. (1641 aa)
	RANBP2	RAN binding protein 2. (2930 aa)
	TPR	Translocated promoter region, nuclear basket protein. (2400 aa)
	PCID2	PCI domain containing 2. (400 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CETN3	ENY2	ENSFALP00000009412	ENSFALP00000006384	Centrin 3.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.963
CETN3	MCM3AP	ENSFALP00000009412	ENSFALP00000004215	Centrin 3.	Minichromosome maintenance complex component 3 associated protein.	0.993
CETN3	PCID2	ENSFALP00000009412	ENSFALP00000003349	Centrin 3.	PCI domain containing 2.	0.759
CETN3	TPR	ENSFALP00000009412	ENSFALP00000003427	Centrin 3.	Translocated promoter region, nuclear basket protein.	0.442
ENY2	CETN3	ENSFALP00000006384	ENSFALP00000009412	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Centrin 3.	0.963
ENY2	MCM3AP	ENSFALP00000006384	ENSFALP00000004215	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Minichromosome maintenance complex component 3 associated protein.	0.995
ENY2	NUP153	ENSFALP00000006384	ENSFALP00000013971	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Nucleoporin 153.	0.750
ENY2	PCID2	ENSFALP00000006384	ENSFALP00000003349	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	PCI domain containing 2.	0.939
MAD1L1	MAD2L1	ENSFALP00000014519	ENSFALP00000000894	Mitotic arrest deficient 1 like 1.	Mitotic arrest deficient 2 like 1.	0.999
MAD1L1	MCM3AP	ENSFALP00000014519	ENSFALP00000004215	Mitotic arrest deficient 1 like 1.	Minichromosome maintenance complex component 3 associated protein.	0.556
MAD1L1	NUP153	ENSFALP00000014519	ENSFALP00000013971	Mitotic arrest deficient 1 like 1.	Nucleoporin 153.	0.414
MAD1L1	PCID2	ENSFALP00000014519	ENSFALP00000003349	Mitotic arrest deficient 1 like 1.	PCI domain containing 2.	0.531
MAD1L1	TPR	ENSFALP00000014519	ENSFALP00000003427	Mitotic arrest deficient 1 like 1.	Translocated promoter region, nuclear basket protein.	0.587
MAD2L1	MAD1L1	ENSFALP00000000894	ENSFALP00000014519	Mitotic arrest deficient 2 like 1.	Mitotic arrest deficient 1 like 1.	0.999
MAD2L1	NUP98	ENSFALP00000000894	ENSFALP00000010638	Mitotic arrest deficient 2 like 1.	Nucleoporin 98.	0.611
MAD2L1	PCID2	ENSFALP00000000894	ENSFALP00000003349	Mitotic arrest deficient 2 like 1.	PCI domain containing 2.	0.510
MAD2L1	RANBP2	ENSFALP00000000894	ENSFALP00000003691	Mitotic arrest deficient 2 like 1.	RAN binding protein 2.	0.928
MCM3AP	CETN3	ENSFALP00000004215	ENSFALP00000009412	Minichromosome maintenance complex component 3 associated protein.	Centrin 3.	0.993
MCM3AP	ENY2	ENSFALP00000004215	ENSFALP00000006384	Minichromosome maintenance complex component 3 associated protein.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.995
MCM3AP	MAD1L1	ENSFALP00000004215	ENSFALP00000014519	Minichromosome maintenance complex component 3 associated protein.	Mitotic arrest deficient 1 like 1.	0.556