STRINGSTRING
PDLIM7 PDLIM7 LRRC10 LRRC10 MAGI1 MAGI1 PDLIM3 PDLIM3 PDLIM4 PDLIM4 NRAP NRAP CSRP1 CSRP1 U3JMR6_FICAL U3JMR6_FICAL ZYX ZYX PKD2 PKD2 PDLIM5 PDLIM5 LDB3 LDB3 VCL VCL PDLIM1 PDLIM1 PKD2L1 PKD2L1 U3JYS7_FICAL U3JYS7_FICAL MYOT MYOT DAG1 DAG1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDLIM7PDZ and LIM domain 7. (721 aa)
LRRC10Leucine rich repeat containing 10. (274 aa)
MAGI1Membrane associated guanylate kinase, WW and PDZ domain containing 1. (1406 aa)
PDLIM3PDZ and LIM domain 3. (403 aa)
PDLIM4PDZ and LIM domain 4. (380 aa)
NRAPNebulin related anchoring protein. (1737 aa)
CSRP1Cysteine and glycine rich protein 1. (192 aa)
U3JMR6_FICALPeptidase S72 domain-containing protein. (694 aa)
ZYXZyxin. (592 aa)
PKD2Polycystin 2, transient receptor potential cation channel. (821 aa)
PDLIM5PDZ and LIM domain 5. (614 aa)
LDB3LIM domain binding 3. (713 aa)
VCLVinculin. (1168 aa)
PDLIM1PDZ and LIM domain 1. (329 aa)
PKD2L1Polycystin 2 like 1, transient receptor potential cation channel. (779 aa)
U3JYS7_FICALIg-like domain-containing protein. (232 aa)
MYOTMyotilin. (509 aa)
DAG1Dystroglycan 1. (897 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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