31 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BCL2	BCL2 apoptosis regulator. (239 aa)
	PRKN	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (461 aa)
	OPRD1	Opioid receptor delta 1; Belongs to the G-protein coupled receptor 1 family. (296 aa)
	MUL1	Mitochondrial E3 ubiquitin protein ligase 1. (349 aa)
	PINK1	PTEN induced kinase 1. (473 aa)
	LRRK2	Leucine rich repeat kinase 2. (2450 aa)
	STOML2	Stomatin like 2. (361 aa)
	TUSC2	Tumor suppressor 2, mitochondrial calcium regulator. (61 aa)
	PRELID1	PRELI domain containing 1. (215 aa)
	U3K1D1_FICAL	Uncharacterized protein. (76 aa)
	MFN1	Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (740 aa)
	SPART	Spartin. (590 aa)
	PPA2	Pyrophosphatase (inorganic) 2. (301 aa)
	FAM102A	Family with sequence similarity 102 member A. (381 aa)
	PRDX3	Peroxiredoxin 3. (248 aa)
	SLC25A33	Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family. (320 aa)
	PID1	Phosphotyrosine interaction domain containing 1. (211 aa)
	SLC4A11	Solute carrier family 4 member 11. (975 aa)
	GCLC	Glutamate-cysteine ligase catalytic subunit. (583 aa)
	BCO2	Beta-carotene oxygenase 2. (578 aa)
	PPP2R3C	Protein phosphatase 2 regulatory subunit B''gamma. (422 aa)
	BCL2L1	BCL2 like 1. (230 aa)
	U3JPT5_FICAL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (315 aa)
	BAK1	BCL2 antagonist/killer 1. (213 aa)
	NDUFS1	NADH:ubiquinone oxidoreductase core subunit S1; Belongs to the complex I 75 kDa subunit family. (728 aa)
	KDR	Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1345 aa)
	HEBP2	Uncharacterized protein. (183 aa)
	CCN4	Cellular communication network factor 4. (389 aa)
	FAM102B	Family with sequence similarity 102 member B. (359 aa)
	ARL6IP5	PRA1 family protein. (188 aa)
	STOX1	Stork_head domain-containing protein. (298 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAK1	BCL2	ENSFALP00000004061	ENSFALP00000013568	BCL2 antagonist/killer 1.	BCL2 apoptosis regulator.	0.978
BAK1	BCL2L1	ENSFALP00000004061	ENSFALP00000005771	BCL2 antagonist/killer 1.	BCL2 like 1.	0.994
BAK1	U3K1D1_FICAL	ENSFALP00000004061	ENSFALP00000008835	BCL2 antagonist/killer 1.	Uncharacterized protein.	0.704
BCL2	BAK1	ENSFALP00000013568	ENSFALP00000004061	BCL2 apoptosis regulator.	BCL2 antagonist/killer 1.	0.978
BCL2	BCL2L1	ENSFALP00000013568	ENSFALP00000005771	BCL2 apoptosis regulator.	BCL2 like 1.	0.978
BCL2	MFN1	ENSFALP00000013568	ENSFALP00000008738	BCL2 apoptosis regulator.	Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.420
BCL2	U3K1D1_FICAL	ENSFALP00000013568	ENSFALP00000008835	BCL2 apoptosis regulator.	Uncharacterized protein.	0.732
BCL2L1	BAK1	ENSFALP00000005771	ENSFALP00000004061	BCL2 like 1.	BCL2 antagonist/killer 1.	0.994
BCL2L1	BCL2	ENSFALP00000005771	ENSFALP00000013568	BCL2 like 1.	BCL2 apoptosis regulator.	0.978
BCL2L1	HEBP2	ENSFALP00000005771	ENSFALP00000003105	BCL2 like 1.	Uncharacterized protein.	0.746
BCL2L1	MFN1	ENSFALP00000005771	ENSFALP00000008738	BCL2 like 1.	Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.538
BCL2L1	PINK1	ENSFALP00000005771	ENSFALP00000010988	BCL2 like 1.	PTEN induced kinase 1.	0.932
BCL2L1	U3K1D1_FICAL	ENSFALP00000005771	ENSFALP00000008835	BCL2 like 1.	Uncharacterized protein.	0.484
HEBP2	BCL2L1	ENSFALP00000003105	ENSFALP00000005771	Uncharacterized protein.	BCL2 like 1.	0.746
LRRK2	PINK1	ENSFALP00000010534	ENSFALP00000010988	Leucine rich repeat kinase 2.	PTEN induced kinase 1.	0.472
LRRK2	PRKN	ENSFALP00000010534	ENSFALP00000012711	Leucine rich repeat kinase 2.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.612
MFN1	BCL2	ENSFALP00000008738	ENSFALP00000013568	Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	BCL2 apoptosis regulator.	0.420
MFN1	BCL2L1	ENSFALP00000008738	ENSFALP00000005771	Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	BCL2 like 1.	0.538
MFN1	PINK1	ENSFALP00000008738	ENSFALP00000010988	Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	PTEN induced kinase 1.	0.861
MFN1	PRKN	ENSFALP00000008738	ENSFALP00000012711	Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.992