STRINGSTRING
SLC26A7 SLC26A7 VAMP8 VAMP8 TMEM230 TMEM230 LDLRAP1 LDLRAP1 RAB29 RAB29 UNC13D UNC13D GGA3 GGA3 SDCCAG3 SDCCAG3 RAB14 RAB14 RAP2C RAP2C OPTN OPTN INPP5F INPP5F RAB11FIP4 RAB11FIP4 ITSN1 ITSN1 U3JIU8_FICAL U3JIU8_FICAL RAB25 RAB25 LZTR1 LZTR1 AVL9 AVL9 NDRG1 NDRG1 SYT11 SYT11 SCAMP3 SCAMP3 FCHSD1 FCHSD1 NTRK1 NTRK1 LTF LTF AKAP5 AKAP5 RAB4A RAB4A ATP11C ATP11C WASHC1 WASHC1 INPP4A INPP4A SLC9A7 SLC9A7 ATG9A ATG9A SLC9A6 SLC9A6 ATP11A ATP11A RAP2A RAP2A RAB11FIP3 RAB11FIP3 VTI1B VTI1B ARFGEF2 ARFGEF2 RELCH RELCH AMOTL2 AMOTL2 NEU2 NEU2 KCNK1 KCNK1 COMMD1 COMMD1 ABHD17A ABHD17A SCAMP4 SCAMP4 PLEKHJ1 PLEKHJ1 MICALL2 MICALL2 TMUB1 TMUB1 GPER1 GPER1 ACKR4 ACKR4 ARF6 ARF6 RAP2B RAP2B ACKR2 ACKR2 NEU3 NEU3 RASSF9 RASSF9 REP15 REP15 ACKR3 ACKR3 PHETA2 PHETA2 U3KLD6_FICAL U3KLD6_FICAL FZD7 FZD7 RNF11 RNF11 SLC31A1 SLC31A1 SGK3 SGK3 SLC31A2 SLC31A2 GPR161 GPR161 VPS53 VPS53 ABHD17C ABHD17C SORL1 SORL1 U3JTN9_FICAL U3JTN9_FICAL EHD4 EHD4 MCOLN2 MCOLN2 RAB12 RAB12 PACSIN2 PACSIN2 RABGEF1 RABGEF1 RAB11FIP1 RAB11FIP1 U3JX31_FICAL U3JX31_FICAL SLC9A9 SLC9A9 MELTF MELTF ATP13A3 ATP13A3 LOC101815087 LOC101815087 TPCN1 TPCN1 TBC1D12 TBC1D12 FCHSD2 FCHSD2 TPP1 TPP1 GRIA1 GRIA1 ATP11B ATP11B DENND6A DENND6A ZFYVE27 ZFYVE27 SH3TC2 SH3TC2 NISCH NISCH VPS16 VPS16 PHETA1 PHETA1 PDLIM4 PDLIM4 STX8 STX8 NSG1 NSG1 TBC1D14 TBC1D14 U3K4X1_FICAL U3K4X1_FICAL MLC1 MLC1 SORCS2 SORCS2 SH3TC1 SH3TC1 RABEP1 RABEP1 VAMP3 VAMP3 SCAMP1 SCAMP1 RAB8B RAB8B CFTR CFTR RAB11A RAB11A ST8SIA2 ST8SIA2 VPS50 VPS50 SLC1A1 SLC1A1 PLA2G2A PLA2G2A ABHD17B ABHD17B SCAMP5 SCAMP5 SCAMP2 SCAMP2 LAMP5 LAMP5 VPS33B VPS33B DENND6B DENND6B SNF8 SNF8 CLCN3 CLCN3 TUBGCP4 TUBGCP4 VPS51 VPS51 EHD3 EHD3 U3KAB3_FICAL U3KAB3_FICAL STX7 STX7 RAB11B RAB11B APP APP SLC30A10 SLC30A10 RAB11FIP5 RAB11FIP5 RAB10 RAB10 VIPAS39 VIPAS39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SLC26A7Anion exchange transporter. (655 aa)
VAMP8Vesicle associated membrane protein 8. (110 aa)
TMEM230Transmembrane protein 230. (120 aa)
LDLRAP1Low density lipoprotein receptor adaptor protein 1. (309 aa)
RAB29RAB29, member RAS oncogene family. (205 aa)
UNC13DUnc-13 homolog D. (1091 aa)
GGA3Golgi associated, gamma adaptin ear containing, ARF binding protein 3. (750 aa)
SDCCAG3Uncharacterized protein. (159 aa)
RAB14RAB14, member RAS oncogene family. (217 aa)
RAP2CRAP2C, member of RAS oncogene family. (183 aa)
OPTNOptineurin. (556 aa)
INPP5FInositol polyphosphate-5-phosphatase F. (948 aa)
RAB11FIP4RAB11 family interacting protein 4. (630 aa)
ITSN1Intersectin 1. (1704 aa)
U3JIU8_FICALUncharacterized protein. (235 aa)
RAB25RAB25, member RAS oncogene family. (254 aa)
LZTR1Leucine zipper like transcription regulator 1. (786 aa)
AVL9AVL9 cell migration associated. (636 aa)
NDRG1N-myc downstream regulated 1. (403 aa)
SYT11Synaptotagmin 11. (442 aa)
SCAMP3Secretory carrier-associated membrane protein. (220 aa)
FCHSD1FCH and double SH3 domains 1. (647 aa)
NTRK1Tyrosine-protein kinase receptor. (739 aa)
LTFOvotransferrin; Belongs to the transferrin family. (704 aa)
AKAP5A-kinase anchoring protein 5. (446 aa)
RAB4ARAB4A, member RAS oncogene family. (218 aa)
ATP11CPhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1128 aa)
WASHC1WASH complex subunit 1. (476 aa)
INPP4AInositol polyphosphate-4-phosphatase type I A. (939 aa)
SLC9A7Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (640 aa)
ATG9AAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (817 aa)
SLC9A6Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (596 aa)
ATP11APhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1168 aa)
RAP2ARAP2A, member of RAS oncogene family. (174 aa)
RAB11FIP3RAB11 family interacting protein 3. (805 aa)
VTI1BVesicle transport through interaction with t-SNAREs 1B. (195 aa)
ARFGEF2ADP ribosylation factor guanine nucleotide exchange factor 2. (1756 aa)
RELCHRAB11 binding and LisH domain, coiled-coil and HEAT repeat containing. (845 aa)
AMOTL2Angiomotin like 2. (719 aa)
NEU2Neuraminidase 2. (379 aa)
KCNK1Potassium channel subfamily K member. (331 aa)
COMMD1Copper metabolism domain containing 1. (160 aa)
ABHD17AAbhydrolase domain containing 17A. (301 aa)
SCAMP4Secretory carrier-associated membrane protein. (229 aa)
PLEKHJ1Pleckstrin homology domain containing J1. (149 aa)
MICALL2MICAL like 2. (866 aa)
TMUB1Transmembrane and ubiquitin like domain containing 1. (123 aa)
GPER1G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (357 aa)
ACKR4Atypical chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family. (353 aa)
ARF6ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
RAP2BRAP2B, member of RAS oncogene family. (183 aa)
ACKR2Atypical chemokine receptor 2; Belongs to the G-protein coupled receptor 1 family. (363 aa)
NEU3Sialidase domain-containing protein. (164 aa)
RASSF9Ras association domain family member 9. (419 aa)
REP15RAB15 effector protein. (236 aa)
ACKR3Atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family. (361 aa)
PHETA2PH domain containing endocytic trafficking adaptor 2. (267 aa)
U3KLD6_FICALUncharacterized protein. (59 aa)
FZD7Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family. (554 aa)
RNF11RING-type domain-containing protein. (115 aa)
SLC31A1Solute carrier family 31 member 1. (202 aa)
SGK3Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (490 aa)
SLC31A2Solute carrier family 31 member 2. (111 aa)
GPR161G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family. (545 aa)
VPS53VPS53 subunit of GARP complex. (815 aa)
ABHD17CAbhydrolase domain containing 17C. (339 aa)
SORL1Sortilin related receptor 1. (2109 aa)
U3JTN9_FICALUncharacterized protein. (158 aa)
EHD4EH domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (479 aa)
MCOLN2Mucolipin 2. (536 aa)
RAB12RAB12, member RAS oncogene family. (170 aa)
PACSIN2Protein kinase C and casein kinase substrate in neurons 2. (485 aa)
RABGEF1Uncharacterized protein. (505 aa)
RAB11FIP1RAB11 family interacting protein 1. (1109 aa)
U3JX31_FICALUncharacterized protein. (213 aa)
SLC9A9Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (641 aa)
MELTFOvotransferrin; Belongs to the transferrin family. (737 aa)
ATP13A3Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1280 aa)
LOC101815087Ovotransferrin; Belongs to the transferrin family. (740 aa)
TPCN1Two pore segment channel 1. (810 aa)
TBC1D12TBC1 domain family member 12. (454 aa)
FCHSD2FCH and double SH3 domains 2. (743 aa)
TPP1Tripeptidyl peptidase 1. (509 aa)
GRIA1Glutamate ionotropic receptor AMPA type subunit 1. (903 aa)
ATP11BPhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1148 aa)
DENND6ADENN domain containing 6A. (600 aa)
ZFYVE27Zinc finger FYVE-type containing 27. (355 aa)
SH3TC2SH3 domain and tetratricopeptide repeats 2. (1362 aa)
NISCHNischarin. (1251 aa)
VPS16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (848 aa)
PHETA1PH domain containing endocytic trafficking adaptor 1. (230 aa)
PDLIM4PDZ and LIM domain 4. (380 aa)
STX8Syntaxin 8. (188 aa)
NSG1Neuronal vesicle trafficking associated 1. (185 aa)
TBC1D14TBC1 domain family member 14. (711 aa)
U3K4X1_FICALSortilin-Vps10 domain-containing protein. (130 aa)
MLC1Modulator of VRAC current 1. (380 aa)
SORCS2PKD domain-containing protein. (877 aa)
SH3TC1SH3 domain and tetratricopeptide repeats 1. (1330 aa)
RABEP1Rabaptin, RAB GTPase binding effector protein 1. (850 aa)
VAMP3Vesicle associated membrane protein 3. (112 aa)
SCAMP1Secretory carrier-associated membrane protein. (339 aa)
RAB8BRAB8B, member RAS oncogene family. (201 aa)
CFTRCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1403 aa)
RAB11ARAB11A, member RAS oncogene family. (209 aa)
ST8SIA2ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family. (375 aa)
VPS50VPS50 subunit of EARP/GARPII complex. (967 aa)
SLC1A1Amino acid transporter. (492 aa)
PLA2G2APhospholipase A(2). (140 aa)
ABHD17BAbhydrolase domain containing 17B. (288 aa)
SCAMP5Secretory carrier-associated membrane protein. (235 aa)
SCAMP2Secretory carrier-associated membrane protein. (363 aa)
LAMP5Lysosomal associated membrane protein family member 5. (278 aa)
VPS33BUncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (545 aa)
DENND6BDENN domain containing 6B. (580 aa)
SNF8SNF8 subunit of ESCRT-II. (210 aa)
CLCN3Chloride channel protein. (866 aa)
TUBGCP4Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. (666 aa)
VPS51VPS51 subunit of GARP complex. (720 aa)
EHD3EH domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
U3KAB3_FICALUncharacterized protein. (751 aa)
STX7Syntaxin 7; Belongs to the syntaxin family. (257 aa)
RAB11BUncharacterized protein. (218 aa)
APPAmyloid beta precursor protein. (738 aa)
SLC30A10Solute carrier family 30 member 10. (434 aa)
RAB11FIP5RAB11 family interacting protein 5. (492 aa)
RAB10RAB10, member RAS oncogene family. (159 aa)
VIPAS39VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. (462 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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