STRINGSTRING
ERRFI1 ERRFI1 PDX1 PDX1 BIRC5 BIRC5 LOC101808801 LOC101808801 PHOX2B PHOX2B NR1D1 NR1D1 NR4A1 NR4A1 FMC1 FMC1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ERRFI1ERBB receptor feedback inhibitor 1. (464 aa)
PDX1Homeobox domain-containing protein. (261 aa)
BIRC5Baculoviral IAP repeat containing 5. (140 aa)
LOC101808801Uncharacterized protein. (183 aa)
PHOX2BPaired like homeobox 2B. (149 aa)
NR1D1Nuclear receptor subfamily 1 group D member 1. (598 aa)
NR4A1Nuclear receptor subfamily 4 group A member 1. (587 aa)
FMC1Formation of mitochondrial complex V assembly factor 1 homolog. (68 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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