STRINGSTRING
ITGB6 ITGB6 TSHZ1 TSHZ1 CHD7 CHD7 WNT11 WNT11 U3JUP7_FICAL U3JUP7_FICAL LRRC32 LRRC32 TGFBR2 TGFBR2 ITGB8 ITGB8 LEF1 LEF1 CHD9 CHD9 JAG2 JAG2 U3JNK7_FICAL U3JNK7_FICAL U3JNL0_FICAL U3JNL0_FICAL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ITGB6Integrin beta; Belongs to the integrin beta chain family. (791 aa)
TSHZ1Teashirt zinc finger homeobox 1. (1105 aa)
CHD7Chromodomain helicase DNA binding protein 7. (3012 aa)
WNT11Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (354 aa)
U3JUP7_FICALUncharacterized protein. (620 aa)
LRRC32Uncharacterized protein. (667 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
ITGB8Integrin beta; Belongs to the integrin beta chain family. (768 aa)
LEF1Lymphoid enhancer binding factor 1. (331 aa)
CHD9Chromodomain helicase DNA binding protein 9. (2420 aa)
JAG2Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1238 aa)
U3JNK7_FICALProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (282 aa)
U3JNL0_FICALUncharacterized protein. (540 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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