81 items (Ficedula albicollis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BMPER	BMP binding endothelial regulator. (643 aa)
	RAPGEF2	Rap guanine nucleotide exchange factor 2. (1609 aa)
	NTRK1	Tyrosine-protein kinase receptor. (739 aa)
	SERPINF2	Serpin family F member 2; Belongs to the serpin family. (389 aa)
	ARHGAP1	Rho GTPase activating protein 1. (447 aa)
	ADCYAP1	Adenylate cyclase activating polypeptide 1. (180 aa)
	GAREM1	GRB2 associated regulator of MAPK1 subtype 1. (768 aa)
	U3JT47_FICAL	SCY domain-containing protein. (95 aa)
	PDGFC	Platelet derived growth factor C. (345 aa)
	PRXL2C	Peroxiredoxin like 2C. (221 aa)
	FGF18	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (207 aa)
	GAS6	Growth arrest specific 6. (634 aa)
	DDR2	Discoidin domain receptor tyrosine kinase 2. (861 aa)
	KDR	Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1345 aa)
	SEMA7A	Semaphorin 7A (John Milton Hagen blood group); Belongs to the semaphorin family. (479 aa)
	CD4	Uncharacterized protein. (487 aa)
	GLIPR2	GLI pathogenesis related 2; Belongs to the CRISP family. (165 aa)
	TIRAP	TIR domain containing adaptor protein. (237 aa)
	RIPK2	Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. (573 aa)
	LOC101809482	Uncharacterized protein. (873 aa)
	RASGRP1	RAS guanyl releasing protein 1. (671 aa)
	MFHAS1	Malignant fibrous histiocytoma amplified sequence 1. (904 aa)
	CRKL	CRK like proto-oncogene, adaptor protein. (303 aa)
	TEK	TEK receptor tyrosine kinase. (1128 aa)
	HTR2B	5-hydroxytryptamine receptor 2B. (463 aa)
	U3JZ18_FICAL	Uncharacterized protein. (570 aa)
	FLT4	Fms related tyrosine kinase 4; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1381 aa)
	FFAR4	Free fatty acid receptor 4. (356 aa)
	NOX4	NADPH oxidase 4. (600 aa)
	CSF1R	Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (968 aa)
	PDGFRB	Platelet derived growth factor receptor beta; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1093 aa)
	CD74	CD74 molecule. (289 aa)
	ITGB3	Integrin beta; Belongs to the integrin beta chain family. (780 aa)
	TNFSF11	TNF superfamily member 11; Belongs to the tumor necrosis factor family. (298 aa)
	U3K0F8_FICAL	Uncharacterized protein. (780 aa)
	U3K0G1_FICAL	Uncharacterized protein. (176 aa)
	ABL2	Tyrosine-protein kinase. (1123 aa)
	HTR2A	5-hydroxytryptamine receptor 2A. (471 aa)
	FGFR4	Fibroblast growth factor receptor. (803 aa)
	PTPN11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (593 aa)
	NOD1	Nucleotide binding oligomerization domain containing 1. (950 aa)
	NPTN	Neuroplastin. (424 aa)
	GPNMB	Glycoprotein nmb. (646 aa)
	LOC101806429	SCY domain-containing protein. (102 aa)
	CCL19	C-C motif chemokine. (118 aa)
	CCL19-2	SCY domain-containing protein. (96 aa)
	F2R	Coagulation factor II thrombin receptor; Belongs to the G-protein coupled receptor 1 family. (421 aa)
	IL26	Uncharacterized protein. (168 aa)
	PLA2G2A	Phospholipase A(2). (140 aa)
	FSHR	Follicle-stimulating hormone receptor; G protein-coupled receptor for follitropin, the follicle- stimulating hormone. Through cAMP production activates the downstream PI3K-AKT and ERK1/ERK2 signaling pathways. (622 aa)
	CIB1	Calcium and integrin binding 1. (227 aa)
	TNFAIP8L3	TNF alpha induced protein 8 like 3. (204 aa)
	CCN2	Cellular communication network factor 2. (347 aa)
	APP	Amyloid beta precursor protein. (738 aa)
	SLC30A10	Solute carrier family 30 member 10. (434 aa)
	AKAP12	A-kinase anchoring protein 12. (1889 aa)
	PDGFB	Platelet derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (251 aa)
	OPRM1	Opioid receptor mu 1; Belongs to the G-protein coupled receptor 1 family. (327 aa)
	GAREM2	GRB2 associated regulator of MAPK1 subtype 2. (776 aa)
	DNAJC27	DnaJ heat shock protein family (Hsp40) member C27. (275 aa)
	TNFRSF11A	TNF receptor superfamily member 11a. (639 aa)
	FBXW7	F-box and WD repeat domain containing 7. (589 aa)
	FGG	Fibrinogen gamma chain. (436 aa)
	RAMP3	Receptor activity modifying protein 3. (139 aa)
	MARCO	Macrophage receptor with collagenous structure. (480 aa)
	U3KH05_FICAL	C-C motif chemokine. (92 aa)
	PDGFA	Platelet derived growth factor subunit A; Belongs to the PDGF/VEGF growth factor family. (211 aa)
	GPER1	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (357 aa)
	U3KIW0_FICAL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (356 aa)
	U3KJ39_FICAL	Uncharacterized protein. (233 aa)
	GPR183	G protein-coupled receptor 183; Belongs to the G-protein coupled receptor 1 family. (355 aa)
	ACKR3	Atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family. (361 aa)
	DSTYK	Dual serine/threonine and tyrosine protein kinase. (836 aa)
	FGF4	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (164 aa)
	FGF19	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (205 aa)
	ABL1	Tyrosine-protein kinase. (1127 aa)
	U3JG88_FICAL	SLAM domain-containing protein. (68 aa)
	CARD9	Caspase recruitment domain family member 9. (542 aa)
	FGF23	Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family. (210 aa)
	ALKAL2	ALK and LTK ligand 2. (152 aa)
	PTPRC	Protein tyrosine phosphatase receptor type C. (1201 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABL1	ABL2	ENSFALP00000001509	ENSFALP00000008528	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.902
ABL1	CRKL	ENSFALP00000001509	ENSFALP00000007575	Tyrosine-protein kinase.	CRK like proto-oncogene, adaptor protein.	0.962
ABL2	ABL1	ENSFALP00000008528	ENSFALP00000001509	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.902
ABL2	CRKL	ENSFALP00000008528	ENSFALP00000007575	Tyrosine-protein kinase.	CRK like proto-oncogene, adaptor protein.	0.962
ACKR3	CCL19	ENSFALP00000015771	ENSFALP00000010209	Atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.	C-C motif chemokine.	0.562
ACKR3	CCL19-2	ENSFALP00000015771	ENSFALP00000010213	Atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.	SCY domain-containing protein.	0.491
APP	CD74	ENSFALP00000012506	ENSFALP00000008366	Amyloid beta precursor protein.	CD74 molecule.	0.663
BMPER	FLT4	ENSFALP00000002834	ENSFALP00000008205	BMP binding endothelial regulator.	Fms related tyrosine kinase 4; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.448
CARD9	NOD1	ENSFALP00000001835	ENSFALP00000009501	Caspase recruitment domain family member 9.	Nucleotide binding oligomerization domain containing 1.	0.580
CARD9	RIPK2	ENSFALP00000001835	ENSFALP00000005363	Caspase recruitment domain family member 9.	Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains.	0.930
CARD9	U3JZ18_FICAL	ENSFALP00000001835	ENSFALP00000008022	Caspase recruitment domain family member 9.	Uncharacterized protein.	0.930
CCL19	ACKR3	ENSFALP00000010209	ENSFALP00000015771	C-C motif chemokine.	Atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.	0.562
CCL19	CCL19-2	ENSFALP00000010209	ENSFALP00000010213	C-C motif chemokine.	SCY domain-containing protein.	0.587
CCL19-2	ACKR3	ENSFALP00000010213	ENSFALP00000015771	SCY domain-containing protein.	Atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.	0.491
CCL19-2	CCL19	ENSFALP00000010213	ENSFALP00000010209	SCY domain-containing protein.	C-C motif chemokine.	0.587
CCL19-2	U3KH05_FICAL	ENSFALP00000010213	ENSFALP00000014309	SCY domain-containing protein.	C-C motif chemokine.	0.515
CCL19-2	U3KIW0_FICAL	ENSFALP00000010213	ENSFALP00000014964	SCY domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.541
CD4	CSF1R	ENSFALP00000004904	ENSFALP00000008277	Uncharacterized protein.	Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.409
CD4	PTPN11	ENSFALP00000004904	ENSFALP00000009335	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.624
CD4	PTPRC	ENSFALP00000004904	ENSFALP00000002847	Uncharacterized protein.	Protein tyrosine phosphatase receptor type C.	0.735