17 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LAMB3	Laminin subunit beta 3. (1169 aa)
	GAS2	Growth arrest specific 2. (315 aa)
	U3JMR6_FICAL	Peptidase S72 domain-containing protein. (694 aa)
	NTNG1	Netrin G1. (460 aa)
	PXDN	Peroxidasin. (1434 aa)
	NTNG2	Netrin G2. (527 aa)
	FLRT2	Fibronectin leucine rich transmembrane protein 2. (661 aa)
	CAV3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (151 aa)
	MMP11	Matrix metallopeptidase 11. (497 aa)
	DAG1	Dystroglycan 1. (897 aa)
	CAV1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (178 aa)
	CAV2	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (114 aa)
	LAMB1	Laminin subunit beta 1. (1649 aa)
	U3K708_FICAL	Uncharacterized protein. (1417 aa)
	NTN4	Netrin 4. (615 aa)
	LOC101807214	Uncharacterized protein. (647 aa)
	LAMB2	Laminin subunit beta 2. (1642 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAV1	CAV2	ENSFALP00000010549	ENSFALP00000010554	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.995
CAV1	CAV3	ENSFALP00000010549	ENSFALP00000014211	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.960
CAV1	DAG1	ENSFALP00000010549	ENSFALP00000009394	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Dystroglycan 1.	0.441
CAV1	U3JMR6_FICAL	ENSFALP00000010549	ENSFALP00000004070	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Peptidase S72 domain-containing protein.	0.441
CAV2	CAV1	ENSFALP00000010554	ENSFALP00000010549	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.995
CAV2	CAV3	ENSFALP00000010554	ENSFALP00000014211	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.995
CAV3	CAV1	ENSFALP00000014211	ENSFALP00000010549	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.960
CAV3	CAV2	ENSFALP00000014211	ENSFALP00000010554	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.995
DAG1	CAV1	ENSFALP00000009394	ENSFALP00000010549	Dystroglycan 1.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.441
DAG1	LAMB1	ENSFALP00000009394	ENSFALP00000010559	Dystroglycan 1.	Laminin subunit beta 1.	0.694
DAG1	LAMB2	ENSFALP00000009394	ENSFALP00000013601	Dystroglycan 1.	Laminin subunit beta 2.	0.723
FLRT2	NTNG1	ENSFALP00000015143	ENSFALP00000002689	Fibronectin leucine rich transmembrane protein 2.	Netrin G1.	0.443
LAMB1	DAG1	ENSFALP00000010559	ENSFALP00000009394	Laminin subunit beta 1.	Dystroglycan 1.	0.694
LAMB2	DAG1	ENSFALP00000013601	ENSFALP00000009394	Laminin subunit beta 2.	Dystroglycan 1.	0.723
NTNG1	FLRT2	ENSFALP00000002689	ENSFALP00000015143	Netrin G1.	Fibronectin leucine rich transmembrane protein 2.	0.443
U3JMR6_FICAL	CAV1	ENSFALP00000004070	ENSFALP00000010549	Peptidase S72 domain-containing protein.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.441