24 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RHOB	Ras homolog family member B. (196 aa)
	ARF6	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	PSTPIP1	Proline-serine-threonine phosphatase interacting protein 1. (416 aa)
	TMEM19	Transmembrane protein 19. (286 aa)
	PPP1CC	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (309 aa)
	RHOA	Ras homolog family member A. (172 aa)
	PLK4	Polo like kinase 4. (929 aa)
	LOC101816078	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (349 aa)
	CEP55	Centrosomal protein 55. (417 aa)
	MASTL	Microtubule associated serine/threonine kinase like. (842 aa)
	SVIL	Supervillin. (2112 aa)
	WDR73	WD repeat domain 73. (340 aa)
	ZFYVE19	Zinc finger FYVE-type containing 19. (424 aa)
	RAB11FIP3	RAB11 family interacting protein 3. (805 aa)
	SEPTIN2	Septin 2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (362 aa)
	SEPTIN7	Septin 7; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (391 aa)
	RAB11FIP4	RAB11 family interacting protein 4. (630 aa)
	LIMA1	LIM domain and actin binding 1. (734 aa)
	PKN2	Protein kinase N2. (946 aa)
	PKN3	Uncharacterized protein. (949 aa)
	KLHDC8A	Kelch domain containing 8A. (351 aa)
	RHOC	Uncharacterized protein. (197 aa)
	U3JDB8_FICAL	LIM zinc-binding domain-containing protein. (313 aa)
	KLHDC8B	Kelch domain containing 8B. (353 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARF6	RAB11FIP3	ENSFALP00000015092	ENSFALP00000004645	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	RAB11 family interacting protein 3.	0.714
ARF6	RAB11FIP4	ENSFALP00000015092	ENSFALP00000002373	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	RAB11 family interacting protein 4.	0.506
CEP55	PLK4	ENSFALP00000008210	ENSFALP00000008470	Centrosomal protein 55.	Polo like kinase 4.	0.541
KLHDC8B	RAB11FIP3	ENSFALP00000013594	ENSFALP00000004645	Kelch domain containing 8B.	RAB11 family interacting protein 3.	0.514
LOC101816078	PLK4	ENSFALP00000008365	ENSFALP00000008470	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Polo like kinase 4.	0.401
LOC101816078	SEPTIN7	ENSFALP00000008365	ENSFALP00000002891	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Septin 7; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.842
PKN2	RHOA	ENSFALP00000001697	ENSFALP00000009139	Protein kinase N2.	Ras homolog family member A.	0.971
PKN2	RHOB	ENSFALP00000001697	ENSFALP00000015478	Protein kinase N2.	Ras homolog family member B.	0.727
PKN2	RHOC	ENSFALP00000001697	ENSFALP00000000761	Protein kinase N2.	Uncharacterized protein.	0.727
PKN3	RHOA	ENSFALP00000001475	ENSFALP00000009139	Uncharacterized protein.	Ras homolog family member A.	0.687
PKN3	RHOB	ENSFALP00000001475	ENSFALP00000015478	Uncharacterized protein.	Ras homolog family member B.	0.687
PKN3	RHOC	ENSFALP00000001475	ENSFALP00000000761	Uncharacterized protein.	Uncharacterized protein.	0.687
PLK4	CEP55	ENSFALP00000008470	ENSFALP00000008210	Polo like kinase 4.	Centrosomal protein 55.	0.541
PLK4	LOC101816078	ENSFALP00000008470	ENSFALP00000008365	Polo like kinase 4.	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.401
PLK4	PPP1CC	ENSFALP00000008470	ENSFALP00000009433	Polo like kinase 4.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.549
PLK4	PSTPIP1	ENSFALP00000008470	ENSFALP00000011197	Polo like kinase 4.	Proline-serine-threonine phosphatase interacting protein 1.	0.406
PLK4	SEPTIN2	ENSFALP00000008470	ENSFALP00000003571	Polo like kinase 4.	Septin 2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.401
PPP1CC	PLK4	ENSFALP00000009433	ENSFALP00000008470	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Polo like kinase 4.	0.549
PSTPIP1	PLK4	ENSFALP00000011197	ENSFALP00000008470	Proline-serine-threonine phosphatase interacting protein 1.	Polo like kinase 4.	0.406
RAB11FIP3	ARF6	ENSFALP00000004645	ENSFALP00000015092	RAB11 family interacting protein 3.	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	0.714