76 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VAPB	VAMP associated protein B and C. (228 aa)
	RHOQ	Ras homolog family member Q. (218 aa)
	RAB32	RAB32, member RAS oncogene family. (218 aa)
	MRAS	Muscle RAS oncogene homolog. (208 aa)
	CRACR2B	Calcium release activated channel regulator 2B. (709 aa)
	LOC101812644	Uncharacterized protein. (231 aa)
	RAB3C	RAB3C, member RAS oncogene family. (219 aa)
	RAB33A	RAB33A, member RAS oncogene family. (219 aa)
	LOC101808730	Uncharacterized protein. (237 aa)
	RAB11B	Uncharacterized protein. (218 aa)
	RHOBTB3	Rho related BTB domain containing 3. (611 aa)
	HRAS	HRas proto-oncogene, GTPase. (189 aa)
	RHOD	Ras homolog family member D. (209 aa)
	RAB10	RAB10, member RAS oncogene family. (159 aa)
	RAB17	RAB17, member RAS oncogene family. (213 aa)
	RAC2	Rac family small GTPase 2. (192 aa)
	RHOBTB1	Rho related BTB domain containing 1. (694 aa)
	RAB8A	RAB8A, member RAS oncogene family. (207 aa)
	RASD1	Ras related dexamethasone induced 1. (278 aa)
	RND3	Rho family GTPase 3. (244 aa)
	RAC1	Rac family small GTPase 1. (192 aa)
	DIRAS3	Uncharacterized protein. (198 aa)
	RAP2B	RAP2B, member of RAS oncogene family. (183 aa)
	DIRAS2	DIRAS family GTPase 2. (199 aa)
	DIRAS1	DIRAS family GTPase 1. (198 aa)
	RHOB	Ras homolog family member B. (196 aa)
	RAB9B	RAB9B, member RAS oncogene family. (201 aa)
	RAB9A	RAB9A, member RAS oncogene family. (201 aa)
	ARHGAP35	Rho GTPase activating protein 35. (1063 aa)
	RASL12	RAS like family 12. (299 aa)
	RAP1B	RAP1B, member of RAS oncogene family. (184 aa)
	RAB11A	RAB11A, member RAS oncogene family. (209 aa)
	RAB8B	RAB8B, member RAS oncogene family. (201 aa)
	RAB28	RAB28, member RAS oncogene family. (198 aa)
	RAB5A	RAB5A, member RAS oncogene family. (215 aa)
	RIT2	Ras like without CAAX 2. (217 aa)
	RHOA	Ras homolog family member A. (172 aa)
	RAB24	RAB24, member RAS oncogene family. (203 aa)
	RAB7A	RAB7A, member RAS oncogene family. (207 aa)
	RAB38	RAB38, member RAS oncogene family. (235 aa)
	RAB30	RAB30, member RAS oncogene family. (203 aa)
	RRAD	RRAD, Ras related glycolysis inhibitor and calcium channel regulator. (271 aa)
	RAB35	RAB35, member RAS oncogene family. (213 aa)
	U3JX31_FICAL	Uncharacterized protein. (213 aa)
	RHOV	Ras homolog family member V. (231 aa)
	U3JTN9_FICAL	Uncharacterized protein. (158 aa)
	ARHGAP5	Rho GTPase activating protein 5. (1506 aa)
	RAB3B	RAB3B, member RAS oncogene family. (226 aa)
	GEM	GTP binding protein overexpressed in skeletal muscle. (297 aa)
	CRACR2A	Calcium release activated channel regulator 2A. (700 aa)
	RHOT2	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (615 aa)
	KRAS	KRAS proto-oncogene, GTPase. (188 aa)
	RAB19	RAB19, member RAS oncogene family. (216 aa)
	RASEF	RAS and EF-hand domain containing. (606 aa)
	RAB26	RAB26, member RAS oncogene family. (190 aa)
	NRAS	NRAS proto-oncogene, GTPase. (156 aa)
	RHOJ	Ras homolog family member J. (214 aa)
	RAB4A	RAB4A, member RAS oncogene family. (218 aa)
	RHOU	Ras homolog family member U. (184 aa)
	RAB44	Uncharacterized protein. (306 aa)
	RIT1	Ras like without CAAX 1. (184 aa)
	RAB25	RAB25, member RAS oncogene family. (254 aa)
	U3JIU8_FICAL	Uncharacterized protein. (235 aa)
	RHOT1	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (686 aa)
	RAB23	RAB23, member RAS oncogene family. (237 aa)
	RHOBTB2	Rho related BTB domain containing 2. (754 aa)
	RAB37	RAB37, member RAS oncogene family. (265 aa)
	RAB15	RAB15, member RAS oncogene family. (211 aa)
	RRAS2	RAS related 2. (210 aa)
	LOC101814179	Uncharacterized protein. (208 aa)
	U3JDK4_FICAL	Uncharacterized protein. (164 aa)
	RND2	Rho family GTPase 2. (195 aa)
	AGAP1	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1. (793 aa)
	RAB29	RAB29, member RAS oncogene family. (205 aa)
	RAB7B	RAB7B, member RAS oncogene family. (203 aa)
	RAB43	RAB43, member RAS oncogene family. (215 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGAP35	ARHGAP5	ENSFALP00000010892	ENSFALP00000006131	Rho GTPase activating protein 35.	Rho GTPase activating protein 5.	0.901
ARHGAP35	RAC1	ENSFALP00000010892	ENSFALP00000014595	Rho GTPase activating protein 35.	Rac family small GTPase 1.	0.409
ARHGAP35	RAC2	ENSFALP00000010892	ENSFALP00000013466	Rho GTPase activating protein 35.	Rac family small GTPase 2.	0.409
ARHGAP35	RHOA	ENSFALP00000010892	ENSFALP00000009139	Rho GTPase activating protein 35.	Ras homolog family member A.	0.978
ARHGAP35	RHOB	ENSFALP00000010892	ENSFALP00000015478	Rho GTPase activating protein 35.	Ras homolog family member B.	0.795
ARHGAP35	RHOD	ENSFALP00000010892	ENSFALP00000012943	Rho GTPase activating protein 35.	Ras homolog family member D.	0.619
ARHGAP35	RHOJ	ENSFALP00000010892	ENSFALP00000003498	Rho GTPase activating protein 35.	Ras homolog family member J.	0.440
ARHGAP35	RHOQ	ENSFALP00000010892	ENSFALP00000013477	Rho GTPase activating protein 35.	Ras homolog family member Q.	0.440
ARHGAP35	RND2	ENSFALP00000010892	ENSFALP00000000817	Rho GTPase activating protein 35.	Rho family GTPase 2.	0.750
ARHGAP35	RND3	ENSFALP00000010892	ENSFALP00000014471	Rho GTPase activating protein 35.	Rho family GTPase 3.	0.857
ARHGAP5	ARHGAP35	ENSFALP00000006131	ENSFALP00000010892	Rho GTPase activating protein 5.	Rho GTPase activating protein 35.	0.901
ARHGAP5	RHOA	ENSFALP00000006131	ENSFALP00000009139	Rho GTPase activating protein 5.	Ras homolog family member A.	0.969
ARHGAP5	RHOB	ENSFALP00000006131	ENSFALP00000015478	Rho GTPase activating protein 5.	Ras homolog family member B.	0.710
ARHGAP5	RHOD	ENSFALP00000006131	ENSFALP00000012943	Rho GTPase activating protein 5.	Ras homolog family member D.	0.619
ARHGAP5	RHOJ	ENSFALP00000006131	ENSFALP00000003498	Rho GTPase activating protein 5.	Ras homolog family member J.	0.440
ARHGAP5	RHOQ	ENSFALP00000006131	ENSFALP00000013477	Rho GTPase activating protein 5.	Ras homolog family member Q.	0.440
ARHGAP5	RND2	ENSFALP00000006131	ENSFALP00000000817	Rho GTPase activating protein 5.	Rho family GTPase 2.	0.668
ARHGAP5	RND3	ENSFALP00000006131	ENSFALP00000014471	Rho GTPase activating protein 5.	Rho family GTPase 3.	0.775
HRAS	KRAS	ENSFALP00000012683	ENSFALP00000004031	HRas proto-oncogene, GTPase.	KRAS proto-oncogene, GTPase.	0.906
HRAS	NRAS	ENSFALP00000012683	ENSFALP00000003556	HRas proto-oncogene, GTPase.	NRAS proto-oncogene, GTPase.	0.901