STRINGSTRING
OGFOD1 OGFOD1 FTO FTO ALKBH8 ALKBH8 P4HA2 P4HA2 P3H3 P3H3 P4HTM P4HTM P4HA1 P4HA1 ALKBH1 ALKBH1 P3H1 P3H1 PLOD1 PLOD1 OGFOD2 OGFOD2 P4HA3 P4HA3 ALKBH2 ALKBH2 PLOD2 PLOD2 P3H2 P3H2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OGFOD12-oxoglutarate and iron dependent oxygenase domain containing 1. (439 aa)
FTOFTO alpha-ketoglutarate dependent dioxygenase. (419 aa)
ALKBH8AlkB homolog 8, tRNA methyltransferase. (674 aa)
P4HA2Prolyl 4-hydroxylase subunit alpha 2. (519 aa)
P3H3Prolyl 3-hydroxylase 3. (585 aa)
P4HTMProlyl 4-hydroxylase, transmembrane. (384 aa)
P4HA1Prolyl 4-hydroxylase subunit alpha 1. (536 aa)
ALKBH1AlkB homolog 1, histone H2A dioxygenase. (370 aa)
P3H1Prolyl 3-hydroxylase 1. (701 aa)
PLOD1Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. (730 aa)
OGFOD22-oxoglutarate and iron dependent oxygenase domain containing 2. (296 aa)
P4HA3Prolyl 4-hydroxylase subunit alpha 3. (399 aa)
ALKBH2AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase. (238 aa)
PLOD2Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. (773 aa)
P3H2Prolyl 3-hydroxylase 2. (583 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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