STRINGSTRING
SDF2L1 SDF2L1 RYR2 RYR2 ITPR1 ITPR1 SDF2 SDF2 POMT2 POMT2 POMT1 POMT1 ITPR3 ITPR3 ITPR2 ITPR2 RYR3 RYR3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDF2L1Stromal cell derived factor 2 like 1. (191 aa)
RYR2Ryanodine receptor 2. (4972 aa)
ITPR1Inositol 1,4,5-trisphosphate receptor type 1. (2762 aa)
SDF2Stromal cell derived factor 2. (140 aa)
POMT2Protein O-mannosyltransferase 2. (640 aa)
POMT1Protein O-mannosyltransferase 1. (725 aa)
ITPR3Inositol 1,4,5-trisphosphate receptor type 3. (2664 aa)
ITPR2Inositol 1,4,5-trisphosphate receptor type 2. (2692 aa)
RYR3Uncharacterized protein. (4330 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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