STRINGSTRING
DVL1 DVL1 H1-0 H1-0 FOXL2 FOXL2 LOC101816628 LOC101816628 FOXK1 FOXK1 U3KHD5_FICAL U3KHD5_FICAL RFX2 RFX2 H1-8 H1-8 PLEK PLEK FOXP1 FOXP1 RFX4 RFX4 PSMD6 PSMD6 RGS7 RGS7 IRF4 IRF4 SHPRH SHPRH DEPDC1 DEPDC1 PREX1 PREX1 UBR2 UBR2 FOXB1 FOXB1 FOXN3 FOXN3 IRF7 IRF7 GABPA GABPA FOXO4 FOXO4 IRF2 IRF2 GPS1 GPS1 COPS2 COPS2 PSMD13 PSMD13 SNF8 SNF8 U3KA04_FICAL U3KA04_FICAL HSF2 HSF2 RFX6 RFX6 DEPDC1B DEPDC1B DEPDC4 DEPDC4 BLM BLM RFX5 RFX5 ELK3 ELK3 U3K8L0_FICAL U3K8L0_FICAL E2F2 E2F2 DEPDC7 DEPDC7 RFX3 RFX3 LOC101816087 LOC101816087 E2F7 E2F7 CUL1 CUL1 ARID2 ARID2 PSMD11 PSMD11 FOXI1 FOXI1 ELL ELL FOXE3 FOXE3 STN1 STN1 FOXN4 FOXN4 FOXO1 FOXO1 VPS36 VPS36 LARP1 LARP1 LARP1B LARP1B ELF1 ELF1 DVL3 DVL3 HSF4 HSF4 POLR3F POLR3F DEPDC5 DEPDC5 FOXJ2 FOXJ2 E2F4 E2F4 CUL2 CUL2 TFDP2 TFDP2 KAT6B KAT6B LARP4B LARP4B CUL3 CUL3 FOXC2 FOXC2 FOXF1 FOXF1 IRF8 IRF8 FOXN1 FOXN1 KAT6A KAT6A EIF3E EIF3E E2F1 E2F1 RAD21L1 RAD21L1 FOXG1 FOXG1 COPS4 COPS4 ANAPC2 ANAPC2 ORC1 ORC1 UBR1 UBR1 PREX2 PREX2 ASCC3 ASCC3 HELQ HELQ PLEK2 PLEK2 ERG ERG ETS1 ETS1 E2F5 E2F5 ELF2 ELF2 FOXM1 FOXM1 U3JNU2_FICAL U3JNU2_FICAL ASMT ASMT ASMTL ASMTL RGS11 RGS11 RFX8 RFX8 HP1BP3 HP1BP3 PIKFYVE PIKFYVE ETV5 ETV5 CDT1 CDT1 TFDP1 TFDP1 CUL4A CUL4A ETV7 ETV7 GPR155 GPR155 ELF3 ELF3 ETV6 ETV6 RGS9 RGS9 PSMD12 PSMD12 DEPTOR DEPTOR RAD21 RAD21 RAPGEF4 RAPGEF4 LARP4 LARP4 HFM1 HFM1 E2F8 E2F8 CUL4B CUL4B SNRNP200 SNRNP200 ADAR ADAR FOXO6 FOXO6 RPA2 RPA2 FOXJ1 FOXJ1 LARP7 LARP7 METTL5 METTL5 KLHL23 KLHL23 CUL9 CUL9 U3JDL2_FICAL U3JDL2_FICAL FOXK2 FOXK2 ELK4 ELK4 IRF6 IRF6 PSMD3 PSMD3 CUL5 CUL5 ELL2 ELL2 CDC6 CDC6 HSF1 HSF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DVL1Dishevelled segment polarity protein 1. (687 aa)
H1-0H1 histone family member 0. (188 aa)
FOXL2Forkhead box L2. (307 aa)
LOC101816628H15 domain-containing protein. (220 aa)
FOXK1Forkhead box K1. (539 aa)
U3KHD5_FICALHTH La-type RNA-binding domain-containing protein. (245 aa)
RFX2Regulatory factor X2. (732 aa)
H1-8H15 domain-containing protein. (285 aa)
PLEKPleckstrin. (353 aa)
FOXP1Fork-head domain-containing protein. (716 aa)
RFX4Regulatory factor X4. (655 aa)
PSMD6Proteasome 26S subunit, non-ATPase 6. (348 aa)
RGS7Regulator of G protein signaling 7. (462 aa)
IRF4Interferon regulatory factor 4. (446 aa)
SHPRHSNF2 histone linker PHD RING helicase. (1695 aa)
DEPDC1DEP domain containing 1. (799 aa)
PREX1Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1. (1616 aa)
UBR2E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1722 aa)
FOXB1Forkhead box B1. (321 aa)
FOXN3Forkhead box N3. (496 aa)
IRF7Interferon regulatory factor 7. (512 aa)
GABPAGA binding protein transcription factor subunit alpha. (455 aa)
FOXO4Forkhead box O4. (594 aa)
IRF2Interferon regulatory factor. (348 aa)
GPS1G protein pathway suppressor 1. (550 aa)
COPS2COP9 signalosome subunit 2. (369 aa)
PSMD13Proteasome 26S subunit, non-ATPase 13. (376 aa)
SNF8SNF8 subunit of ESCRT-II. (210 aa)
U3KA04_FICALH15 domain-containing protein. (266 aa)
HSF2Heat shock transcription factor 2. (568 aa)
RFX6Regulatory factor X6. (855 aa)
DEPDC1BDEP domain containing 1B. (529 aa)
DEPDC4DEP domain containing 4. (514 aa)
BLMBLM RecQ like helicase. (1235 aa)
RFX5Regulatory factor X5. (254 aa)
ELK3ETS transcription factor ELK3. (406 aa)
U3K8L0_FICALPeptidase_M24 domain-containing protein. (359 aa)
E2F2E2F transcription factor 2. (450 aa)
DEPDC7DEP domain containing 7. (519 aa)
RFX3Regulatory factor X3. (749 aa)
LOC101816087Uncharacterized protein. (398 aa)
E2F7E2F transcription factor 7. (883 aa)
CUL1Cullin 1; Belongs to the cullin family. (677 aa)
ARID2AT-rich interaction domain 2. (1825 aa)
PSMD11Proteasome 26S subunit, non-ATPase 11. (394 aa)
FOXI1Forkhead box I1. (375 aa)
ELLElongation factor for RNA polymerase II. (566 aa)
FOXE3Fork-head domain-containing protein. (324 aa)
STN1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (363 aa)
FOXN4Forkhead box N4. (511 aa)
FOXO1Forkhead box O1. (506 aa)
VPS36Vacuolar protein sorting 36 homolog. (386 aa)
LARP1La ribonucleoprotein domain family member 1. (815 aa)
LARP1BLa ribonucleoprotein domain family member 1B. (921 aa)
ELF1E74 like ETS transcription factor 1. (627 aa)
DVL3Dishevelled segment polarity protein 3. (671 aa)
HSF4Heat shock transcription factor 4. (510 aa)
POLR3FDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (275 aa)
DEPDC5DEP domain-containing protein. (1592 aa)
FOXJ2Forkhead box J2. (542 aa)
E2F4E2F transcription factor 4. (406 aa)
CUL2Cullin 2; Belongs to the cullin family. (745 aa)
TFDP2Transcription factor. (441 aa)
KAT6BHistone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1738 aa)
LARP4BLa ribonucleoprotein domain family member 4B. (725 aa)
CUL3Cullin 3; Belongs to the cullin family. (750 aa)
FOXC2Forkhead box C2. (512 aa)
FOXF1Forkhead box F1. (344 aa)
IRF8Interferon regulatory factor 8. (426 aa)
FOXN1Forkhead box N1. (653 aa)
KAT6AHistone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (2009 aa)
EIF3EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (445 aa)
E2F1E2F transcription factor 1. (418 aa)
RAD21L1RAD21 cohesin complex component like 1. (568 aa)
FOXG1Forkhead box G1. (463 aa)
COPS4COP9 signalosome subunit 4. (408 aa)
ANAPC2Anaphase promoting complex subunit 2; Belongs to the cullin family. (746 aa)
ORC1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (870 aa)
UBR1E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1704 aa)
PREX2Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2. (1606 aa)
ASCC3Activating signal cointegrator 1 complex subunit 3. (2207 aa)
HELQHelicase, POLQ like. (961 aa)
PLEK2Pleckstrin 2. (355 aa)
ERGETS transcription factor ERG. (486 aa)
ETS1ETS proto-oncogene 1, transcription factor. (412 aa)
E2F5E2F transcription factor 5. (349 aa)
ELF2E74 like ETS transcription factor 2. (595 aa)
FOXM1Forkhead box M1. (790 aa)
U3JNU2_FICALHSF_DOMAIN domain-containing protein. (433 aa)
ASMTAcetylserotonin O-methyltransferase. (352 aa)
ASMTLAcetylserotonin O-methyltransferase like. (559 aa)
RGS11Regulator of G protein signaling 11. (456 aa)
RFX8Uncharacterized protein. (160 aa)
HP1BP3Heterochromatin protein 1 binding protein 3. (557 aa)
PIKFYVEPhosphoinositide kinase, FYVE-type zinc finger containing. (2117 aa)
ETV5ETS variant 5. (524 aa)
CDT1Chromatin licensing and DNA replication factor 1. (560 aa)
TFDP1Transcription factor. (412 aa)
CUL4ACullin 4A; Belongs to the cullin family. (820 aa)
ETV7ETS variant 7. (407 aa)
GPR155G protein-coupled receptor 155. (856 aa)
ELF3E74 like ETS transcription factor 3. (368 aa)
ETV6ETS variant 6. (406 aa)
RGS9Regulator of G protein signaling 9. (485 aa)
PSMD12Proteasome 26S subunit, non-ATPase 12. (456 aa)
DEPTORDEP domain containing MTOR interacting protein. (397 aa)
RAD21RAD21 cohesin complex component. (631 aa)
RAPGEF4Rap guanine nucleotide exchange factor 4. (1026 aa)
LARP4La ribonucleoprotein domain family member 4. (654 aa)
HFM1Helicase for meiosis 1. (1426 aa)
E2F8E2F transcription factor 8. (898 aa)
CUL4BCullin 4B; Belongs to the cullin family. (888 aa)
SNRNP200Uncharacterized protein. (2104 aa)
ADARAdenosine deaminase RNA specific. (1060 aa)
FOXO6Forkhead box O6. (618 aa)
RPA2Replication protein A2. (232 aa)
FOXJ1Forkhead box J1. (405 aa)
LARP7La ribonucleoprotein domain family member 7. (602 aa)
METTL5Methyltransferase like 5. (214 aa)
KLHL23Kelch like family member 23. (572 aa)
CUL9CULLIN_2 domain-containing protein; Belongs to the cullin family. (858 aa)
U3JDL2_FICALUncharacterized protein; Belongs to the cullin family. (1922 aa)
FOXK2Forkhead box K2. (604 aa)
ELK4ETS transcription factor ELK4. (531 aa)
IRF6Interferon regulatory factor 6. (403 aa)
PSMD3Proteasome 26S subunit, non-ATPase 3. (526 aa)
CUL5Cullin 5; Belongs to the cullin family. (806 aa)
ELL2ELL domain-containing protein. (129 aa)
CDC6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (624 aa)
HSF1HSF_DOMAIN domain-containing protein. (133 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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