45 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PREX1	Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1. (1616 aa)
	RALGPS2	Ral GEF with PH domain and SH3 binding motif 2. (584 aa)
	DNMBP	Dynamin binding protein. (1514 aa)
	KNDC1	Kinase non-catalytic C-lobe domain containing 1. (1722 aa)
	PLCE1	Phosphoinositide phospholipase C. (2328 aa)
	RAPGEFL1	Rap guanine nucleotide exchange factor like 1. (508 aa)
	RAPGEF6	Uncharacterized protein. (1659 aa)
	SH2D3C	SH2 domain containing 3C. (886 aa)
	RAPGEF1	Rap guanine nucleotide exchange factor 1. (1206 aa)
	RALGDS	Uncharacterized protein. (793 aa)
	VAV2	Vav guanine nucleotide exchange factor 2. (892 aa)
	SOS2	SOS Ras/Rho guanine nucleotide exchange factor 2. (1332 aa)
	RALGPS1	Ral GEF with PH domain and SH3 binding motif 1. (615 aa)
	RAPGEF4	Rap guanine nucleotide exchange factor 4. (1026 aa)
	BCAR3	BCAR3 adaptor protein, NSP family member. (895 aa)
	SOS1	SOS Ras/Rac guanine nucleotide exchange factor 1. (1265 aa)
	VAV3	Vav guanine nucleotide exchange factor 3. (874 aa)
	RAPGEF2	Rap guanine nucleotide exchange factor 2. (1609 aa)
	RGL1	Ral guanine nucleotide dissociation stimulator like 1. (774 aa)
	ARHGEF4	Rho guanine nucleotide exchange factor 4. (625 aa)
	ARHGEF6	Rac/Cdc42 guanine nucleotide exchange factor 6. (773 aa)
	MCF2	MCF.2 cell line derived transforming sequence. (1080 aa)
	MCF2L	MCF.2 cell line derived transforming sequence like. (1190 aa)
	ARHGEF7	Rho guanine nucleotide exchange factor 7. (705 aa)
	ARHGEF5	Uncharacterized protein. (530 aa)
	TIAM1	T cell lymphoma invasion and metastasis 1. (1528 aa)
	PREX2	Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2. (1606 aa)
	RASGRP1	RAS guanyl releasing protein 1. (671 aa)
	RASGEF1B	RasGEF domain family member 1B. (473 aa)
	ARHGEF12	Rho guanine nucleotide exchange factor 12. (1602 aa)
	ABR	ABR activator of RhoGEF and GTPase. (817 aa)
	U3JVH8_FICAL	DH domain-containing protein. (214 aa)
	RASGEF1A	RasGEF domain family member 1A. (491 aa)
	BCR	BCR activator of RhoGEF and GTPase. (1349 aa)
	MCF2L2	MCF.2 cell line derived transforming sequence-like 2. (1272 aa)
	ECT2	Epithelial cell transforming 2. (986 aa)
	ARHGEF3	Rho guanine nucleotide exchange factor 3. (571 aa)
	RAPGEF5	Rap guanine nucleotide exchange factor 5. (755 aa)
	RAPGEF3	Rap guanine nucleotide exchange factor 3. (747 aa)
	RASGRF1	Ras protein specific guanine nucleotide releasing factor 1. (1029 aa)
	NET1	Neuroepithelial cell transforming 1. (534 aa)
	RASGRP3	RAS guanyl releasing protein 3. (615 aa)
	TIAM2	T cell lymphoma invasion and metastasis 2. (1726 aa)
	RASGEF1C	RasGEF domain family member 1C. (472 aa)
	RASGRF2	Ras protein specific guanine nucleotide releasing factor 2. (1240 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGEF12	ARHGEF6	ENSFALP00000006232	ENSFALP00000003913	Rho guanine nucleotide exchange factor 12.	Rac/Cdc42 guanine nucleotide exchange factor 6.	0.940
ARHGEF12	ARHGEF7	ENSFALP00000006232	ENSFALP00000004560	Rho guanine nucleotide exchange factor 12.	Rho guanine nucleotide exchange factor 7.	0.433
ARHGEF12	ECT2	ENSFALP00000006232	ENSFALP00000008799	Rho guanine nucleotide exchange factor 12.	Epithelial cell transforming 2.	0.562
ARHGEF12	TIAM1	ENSFALP00000006232	ENSFALP00000004895	Rho guanine nucleotide exchange factor 12.	T cell lymphoma invasion and metastasis 1.	0.444
ARHGEF12	TIAM2	ENSFALP00000006232	ENSFALP00000013037	Rho guanine nucleotide exchange factor 12.	T cell lymphoma invasion and metastasis 2.	0.444
ARHGEF6	ARHGEF12	ENSFALP00000003913	ENSFALP00000006232	Rac/Cdc42 guanine nucleotide exchange factor 6.	Rho guanine nucleotide exchange factor 12.	0.940
ARHGEF6	ECT2	ENSFALP00000003913	ENSFALP00000008799	Rac/Cdc42 guanine nucleotide exchange factor 6.	Epithelial cell transforming 2.	0.491
ARHGEF6	U3JVH8_FICAL	ENSFALP00000003913	ENSFALP00000006782	Rac/Cdc42 guanine nucleotide exchange factor 6.	DH domain-containing protein.	0.433
ARHGEF7	ARHGEF12	ENSFALP00000004560	ENSFALP00000006232	Rho guanine nucleotide exchange factor 7.	Rho guanine nucleotide exchange factor 12.	0.433
ARHGEF7	ECT2	ENSFALP00000004560	ENSFALP00000008799	Rho guanine nucleotide exchange factor 7.	Epithelial cell transforming 2.	0.491
ARHGEF7	U3JVH8_FICAL	ENSFALP00000004560	ENSFALP00000006782	Rho guanine nucleotide exchange factor 7.	DH domain-containing protein.	0.433
DNMBP	RAPGEF1	ENSFALP00000008394	ENSFALP00000001522	Dynamin binding protein.	Rap guanine nucleotide exchange factor 1.	0.512
ECT2	ARHGEF12	ENSFALP00000008799	ENSFALP00000006232	Epithelial cell transforming 2.	Rho guanine nucleotide exchange factor 12.	0.562
ECT2	ARHGEF6	ENSFALP00000008799	ENSFALP00000003913	Epithelial cell transforming 2.	Rac/Cdc42 guanine nucleotide exchange factor 6.	0.491
ECT2	ARHGEF7	ENSFALP00000008799	ENSFALP00000004560	Epithelial cell transforming 2.	Rho guanine nucleotide exchange factor 7.	0.491
ECT2	U3JVH8_FICAL	ENSFALP00000008799	ENSFALP00000006782	Epithelial cell transforming 2.	DH domain-containing protein.	0.562
RAPGEF1	DNMBP	ENSFALP00000001522	ENSFALP00000008394	Rap guanine nucleotide exchange factor 1.	Dynamin binding protein.	0.512
RAPGEF1	VAV2	ENSFALP00000001522	ENSFALP00000001657	Rap guanine nucleotide exchange factor 1.	Vav guanine nucleotide exchange factor 2.	0.467
RAPGEF1	VAV3	ENSFALP00000001522	ENSFALP00000002763	Rap guanine nucleotide exchange factor 1.	Vav guanine nucleotide exchange factor 3.	0.467
RAPGEF3	RAPGEF4	ENSFALP00000010819	ENSFALP00000002348	Rap guanine nucleotide exchange factor 3.	Rap guanine nucleotide exchange factor 4.	0.555