104 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	COL4A1-2	Collagen IV NC1 domain-containing protein. (193 aa)
	P3H4	Prolyl 3-hydroxylase family member 4 (non-enzymatic). (328 aa)
	LAMB3	Laminin subunit beta 3. (1169 aa)
	U3JC93_FICAL	Endostatin domain-containing protein. (1019 aa)
	COL4A6	Collagen type IV alpha 6 chain. (1692 aa)
	COL4A5	Collagen type IV alpha 5 chain. (1697 aa)
	COL27A1	Fibrillar collagen NC1 domain-containing protein. (1253 aa)
	U3JEX9_FICAL	Fibrillar collagen NC1 domain-containing protein. (775 aa)
	U3JEJ5_FICAL	Uncharacterized protein. (248 aa)
	P4HA2	Prolyl 4-hydroxylase subunit alpha 2. (519 aa)
	LOC101817811	Uncharacterized protein. (1152 aa)
	BMP1	Metalloendopeptidase. (787 aa)
	COL8A2	Collagen type VIII alpha 2 chain. (432 aa)
	ENSFALP00000003225	annotation not available (140 aa)
	COLGALT2	Collagen beta(1-O)galactosyltransferase 2. (548 aa)
	LAMC2	Laminin subunit gamma 2. (1182 aa)
	U3JJF8_FICAL	VWFA domain-containing protein. (1614 aa)
	COL11A1	Collagen type XI alpha 1 chain. (1809 aa)
	COL12A1	Collagen type XII alpha 1 chain. (3129 aa)
	COL14A1	Collagen type XIV alpha 1 chain. (1895 aa)
	VWA2	Von Willebrand factor A domain containing 2. (814 aa)
	C1QTNF3	C1q domain-containing protein. (246 aa)
	PXDN	Peroxidasin. (1434 aa)
	COL21A1	Collagen type XXI alpha 1 chain. (959 aa)
	COL5A1	Collagen type V alpha 1 chain. (1485 aa)
	LOXL2	Lysyl oxidase like 2. (392 aa)
	MEP1A	Meprin A subunit. (716 aa)
	CERCAM	Cerebral endothelial cell adhesion molecule. (573 aa)
	OGFOD3	2-oxoglutarate and iron dependent oxygenase domain containing 3. (294 aa)
	COL9A2	Collagen type IX alpha 2 chain. (667 aa)
	LOXL1	Lysyl oxidase like 1. (211 aa)
	COL25A1	Collagen type XXV alpha 1 chain. (503 aa)
	U3KCG6_FICAL	C1q domain-containing protein. (212 aa)
	P4HB	Protein disulfide-isomerase. (516 aa)
	U3KB81_FICAL	Uncharacterized protein. (1432 aa)
	TLL1	Metalloendopeptidase. (971 aa)
	U3K965_FICAL	Uncharacterized protein. (773 aa)
	COL10A1	C1q domain-containing protein. (677 aa)
	COL4A1	Collagen type IV alpha 1 chain. (1485 aa)
	U3K7K5_FICAL	Uncharacterized protein. (1213 aa)
	TICRR	TOPBP1 interacting checkpoint and replication regulator. (1853 aa)
	COL9A3	Collagen type IX alpha 3 chain. (682 aa)
	COL20A1	Uncharacterized protein. (1476 aa)
	COL1A2	Collagen type I alpha 2 chain. (1332 aa)
	U3K708_FICAL	Uncharacterized protein. (1417 aa)
	P3H1	Prolyl 3-hydroxylase 1. (701 aa)
	COL28A1	Collagen type XXVIII alpha 1 chain. (1159 aa)
	PLOD1	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. (730 aa)
	PPIB	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (202 aa)
	U3K581_FICAL	EMI domain-containing protein. (340 aa)
	C1QL1	C1q domain-containing protein. (233 aa)
	JAZF1	JAZF zinc finger 1. (211 aa)
	C1QTNF7	C1q and TNF related 7. (291 aa)
	COLQ	Collagen like tail subunit of asymmetric acetylcholinesterase. (453 aa)
	OGFOD2	2-oxoglutarate and iron dependent oxygenase domain containing 2. (296 aa)
	U3K371_FICAL	Uncharacterized protein. (965 aa)
	C1QTNF2	C1q and TNF related 2. (284 aa)
	COL17A1	Collagen type XVII alpha 1 chain. (1514 aa)
	ADAMTS3	ADAM metallopeptidase with thrombospondin type 1 motif 3. (978 aa)
	COL8A1	Collagen type VIII alpha 1 chain. (739 aa)
	U3JSH8_FICAL	Uncharacterized protein. (473 aa)
	CRTAP	Cartilage associated protein. (282 aa)
	P4HA3	Prolyl 4-hydroxylase subunit alpha 3. (399 aa)
	P3H3	Prolyl 3-hydroxylase 3. (585 aa)
	COL3A1	Collagen type III alpha 1 chain. (1460 aa)
	COL5A2	Fibrillar collagen NC1 domain-containing protein. (1300 aa)
	U3JPD1_FICAL	VWFC domain-containing protein. (145 aa)
	COL4A2	Collagen type IV alpha 2 chain. (826 aa)
	PDIA2	Protein disulfide isomerase family A member 2. (502 aa)
	COL6A2	Collagen type VI alpha 2 chain. (1023 aa)
	COL6A1	Collagen type VI alpha 1 chain. (1039 aa)
	COL18A1	Collagen type XVIII alpha 1 chain. (1349 aa)
	SCARA3	Uncharacterized protein. (297 aa)
	LOXL4	Lysyl oxidase like 4. (757 aa)
	U3K0L0_FICAL	Uncharacterized protein. (2919 aa)
	ADAMTS2	ADAM metallopeptidase with thrombospondin type 1 motif 2. (991 aa)
	COL23A1	Uncharacterized protein. (526 aa)
	LOX	Lysyl oxidase. (279 aa)
	PPIC	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (174 aa)
	C1QL3	Complement C1q like 3. (258 aa)
	P3H2	Prolyl 3-hydroxylase 2. (583 aa)
	TLL2	Metalloendopeptidase. (961 aa)
	PLOD2	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. (773 aa)
	PCOLCE2	Procollagen C-endopeptidase enhancer 2. (296 aa)
	COL19A1	Collagen type XIX alpha 1 chain. (680 aa)
	COL4A3	Collagen type IV alpha 3 chain. (1681 aa)
	COL4A4	Collagen type IV alpha 4 chain. (1686 aa)
	MMRN2	Multimerin 2. (992 aa)
	SERPINH1	Serpin family H member 1; Belongs to the serpin family. (408 aa)
	U3JVE4_FICAL	Uncharacterized protein. (446 aa)
	U3JUU3_FICAL	Fibrillar collagen NC1 domain-containing protein. (1810 aa)
	LOC101806951	Metalloendopeptidase. (445 aa)
	MEP1B	Meprin A subunit. (732 aa)
	U3KIN0_FICAL	Uncharacterized protein. (446 aa)
	MOSMO	Modulator of smoothened. (169 aa)
	C1QL2	Complement C1q like 2. (306 aa)
	U3KFQ7_FICAL	LAM_G_DOMAIN domain-containing protein. (1372 aa)
	COL13A1	Collagen type XIII alpha 1 chain. (629 aa)
	P4HTM	Prolyl 4-hydroxylase, transmembrane. (384 aa)
	U3KEH6_FICAL	VWFC domain-containing protein. (151 aa)
	P4HA1	Prolyl 4-hydroxylase subunit alpha 1. (536 aa)
	COL6A3	Collagen type VI alpha 3 chain. (3212 aa)
	ADAMTS14	ADAM metallopeptidase with thrombospondin type 1 motif 14. (1128 aa)
	U3KCP4_FICAL	Metalloendopeptidase. (409 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP1	PCOLCE2	ENSFALP00000000033	ENSFALP00000007373	Metalloendopeptidase.	Procollagen C-endopeptidase enhancer 2.	0.512
C1QTNF2	COL8A1	ENSFALP00000009290	ENSFALP00000006030	C1q and TNF related 2.	Collagen type VIII alpha 1 chain.	0.400
C1QTNF3	ENSFALP00000003225	ENSFALP00000002194	ENSFALP00000003225	C1q domain-containing protein.	annotation not available	0.480
C1QTNF3	U3JSH8_FICAL	ENSFALP00000002194	ENSFALP00000005732	C1q domain-containing protein.	Uncharacterized protein.	0.418
C1QTNF7	ENSFALP00000003225	ENSFALP00000009724	ENSFALP00000003225	C1q and TNF related 7.	annotation not available	0.588
C1QTNF7	U3JSH8_FICAL	ENSFALP00000009724	ENSFALP00000005732	C1q and TNF related 7.	Uncharacterized protein.	0.558
CERCAM	COL17A1	ENSFALP00000001411	ENSFALP00000009200	Cerebral endothelial cell adhesion molecule.	Collagen type XVII alpha 1 chain.	0.456
CERCAM	COL6A2	ENSFALP00000001411	ENSFALP00000004178	Cerebral endothelial cell adhesion molecule.	Collagen type VI alpha 2 chain.	0.488
CERCAM	COL8A1	ENSFALP00000001411	ENSFALP00000006030	Cerebral endothelial cell adhesion molecule.	Collagen type VIII alpha 1 chain.	0.425
CERCAM	OGFOD2	ENSFALP00000001411	ENSFALP00000009642	Cerebral endothelial cell adhesion molecule.	2-oxoglutarate and iron dependent oxygenase domain containing 2.	0.471
CERCAM	PLOD1	ENSFALP00000001411	ENSFALP00000010472	Cerebral endothelial cell adhesion molecule.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.	0.635
CERCAM	PLOD2	ENSFALP00000001411	ENSFALP00000007392	Cerebral endothelial cell adhesion molecule.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.	0.618
COL10A1	COL4A1-2	ENSFALP00000011475	ENSFALP00000003316	C1q domain-containing protein.	Collagen IV NC1 domain-containing protein.	0.423
COL10A1	U3K581_FICAL	ENSFALP00000011475	ENSFALP00000010185	C1q domain-containing protein.	EMI domain-containing protein.	0.446
COL11A1	COL5A2	ENSFALP00000002679	ENSFALP00000004640	Collagen type XI alpha 1 chain.	Fibrillar collagen NC1 domain-containing protein.	0.467
COL13A1	COL4A1-2	ENSFALP00000013786	ENSFALP00000003316	Collagen type XIII alpha 1 chain.	Collagen IV NC1 domain-containing protein.	0.844
COL13A1	U3K581_FICAL	ENSFALP00000013786	ENSFALP00000010185	Collagen type XIII alpha 1 chain.	EMI domain-containing protein.	0.495
COL17A1	CERCAM	ENSFALP00000009200	ENSFALP00000001411	Collagen type XVII alpha 1 chain.	Cerebral endothelial cell adhesion molecule.	0.456
COL17A1	COL27A1	ENSFALP00000009200	ENSFALP00000001341	Collagen type XVII alpha 1 chain.	Fibrillar collagen NC1 domain-containing protein.	0.488
COL17A1	COL6A2	ENSFALP00000009200	ENSFALP00000004178	Collagen type XVII alpha 1 chain.	Collagen type VI alpha 2 chain.	0.527