STRINGSTRING
SRC SRC U3JST0_FICAL U3JST0_FICAL MTERF3 MTERF3 CSNK2A1 CSNK2A1 ATG3 ATG3 ULK2 ULK2 CHMP4B CHMP4B U3JTZ0_FICAL U3JTZ0_FICAL U3JU16_FICAL U3JU16_FICAL AMBRA1 AMBRA1 ATG13 ATG13 LAMTOR3 LAMTOR3 LAMTOR1 LAMTOR1 TUBB6 TUBB6 MAP1LC3B MAP1LC3B CRYGN CRYGN RHEB RHEB PRKAG2 PRKAG2 CSNK2A2 CSNK2A2 MTMR3 MTMR3 LOC101820432 LOC101820432 DYNLL1 DYNLL1 DYNC1LI2 DYNC1LI2 PRKAB1 PRKAB1 SQSTM1 SQSTM1 VDAC1 VDAC1 PGAM5 PGAM5 ULK1 ULK1 PEX5L PEX5L FNDC3A FNDC3A MFN1 MFN1 FNDC3B FNDC3B CRYBB3 CRYBB3 CHMP4C CHMP4C KIAA1671 KIAA1671 IFT88 IFT88 PIK3C3 PIK3C3 USP30 USP30 PWWP2A PWWP2A CETN3 CETN3 DYNC1LI1 DYNC1LI1 KXD1 KXD1 TUBA8 TUBA8 PARK7 PARK7 MFN2 MFN2 CFTR CFTR CHMP3 CHMP3 RB1CC1 RB1CC1 DYNC1I1 DYNC1I1 MTOR MTOR GSAP GSAP PINK1 PINK1 UBE2N UBE2N TUBB1 TUBB1 SLC38A9 SLC38A9 TUBE1 TUBE1 RRAGB RRAGB RPS27A RPS27A CETN1 CETN1 ATG5 ATG5 FUNDC2 FUNDC2 TUBAL3 TUBAL3 UVRAG UVRAG PRKN PRKN PRKAA2 PRKAA2 TOMM22 TOMM22 ATG4C ATG4C MAP1LC3A MAP1LC3A PIK3R4 PIK3R4 RPTOR RPTOR CHMP6 CHMP6 ATG10 ATG10 SAMD15 SAMD15 MTMR14 MTMR14 CHMP2A CHMP2A TOMM5 TOMM5 UBE2V1 UBE2V1 LOC101806546 LOC101806546 TUBB2B TUBB2B MAP1LC3C MAP1LC3C ATG16L1 ATG16L1 TOMM20 TOMM20 WIPI2 WIPI2 ILRUN ILRUN ATG14 ATG14 GABARAPL1 GABARAPL1 MLST8 MLST8 ATG4B ATG4B LAMTOR5 LAMTOR5 PLIN2 PLIN2 TUBB3 TUBB3 RRAGD RRAGD DYNC1H1 DYNC1H1 TUBA1C-2 TUBA1C-2 LAMTOR2 LAMTOR2 GABARAPL2 GABARAPL2 WIPI1 WIPI1 U3JIF3_FICAL U3JIF3_FICAL C17orf75 C17orf75 PRKAA1 PRKAA1 DYNC1I2 DYNC1I2 ATG12 ATG12 ARL13B ARL13B CHMP7 CHMP7 U3JFT9_FICAL U3JFT9_FICAL CHMP2B CHMP2B TSC1 TSC1 FUNDC1 FUNDC1 RRAGC RRAGC NBR1 NBR1 WDR45B WDR45B BECN1 BECN1 ATM ATM TUBA1C TUBA1C U3JBS1_FICAL U3JBS1_FICAL U3JBR7_FICAL U3JBR7_FICAL ATG4A ATG4A PRKAG1 PRKAG1 ATG101 ATG101 ATG7 ATG7 PRKAB2 PRKAB2 TXNDC11 TXNDC11 U3JNB8_FICAL U3JNB8_FICAL PRKAG3 PRKAG3 ATG9A ATG9A TUBA4A TUBA4A PEX5 PEX5 DYNLL2 DYNLL2 LOC101820289 LOC101820289
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SRCTyrosine-protein kinase. (539 aa)
U3JST0_FICALTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
MTERF3Mitochondrial transcription termination factor 3. (427 aa)
CSNK2A1Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (391 aa)
ATG3Autophagy-related protein 3. (314 aa)
ULK2Unc-51 like autophagy activating kinase 2. (1076 aa)
CHMP4BCharged multivesicular body protein 4B. (162 aa)
U3JTZ0_FICALMethyltransf_11 domain-containing protein. (268 aa)
U3JU16_FICALUncharacterized protein. (74 aa)
AMBRA1Autophagy and beclin 1 regulator 1. (1301 aa)
ATG13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (549 aa)
LAMTOR3Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3. (126 aa)
LAMTOR1Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1. (161 aa)
TUBB6Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
MAP1LC3BUncharacterized protein. (124 aa)
CRYGNCrystallin gamma N; Belongs to the beta/gamma-crystallin family. (222 aa)
RHEBRas homolog, mTORC1 binding. (202 aa)
PRKAG2Protein kinase AMP-activated non-catalytic subunit gamma 2. (536 aa)
CSNK2A2Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily. (350 aa)
MTMR3Myotubularin related protein 3. (1204 aa)
LOC101820432Dynein light chain. (89 aa)
DYNLL1Dynein light chain. (94 aa)
DYNC1LI2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (421 aa)
PRKAB1Protein kinase AMP-activated non-catalytic subunit beta 1. (270 aa)
SQSTM1Sequestosome 1. (452 aa)
VDAC1Voltage dependent anion channel 1. (283 aa)
PGAM5PGAM family member 5, mitochondrial serine/threonine protein phosphatase. (254 aa)
ULK1Unc-51 like autophagy activating kinase 1. (1115 aa)
PEX5LPeroxisomal biogenesis factor 5 like. (624 aa)
FNDC3AFibronectin type III domain containing 3A. (1166 aa)
MFN1Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (740 aa)
FNDC3BFibronectin type III domain containing 3B. (883 aa)
CRYBB3Crystallin beta B3; Belongs to the beta/gamma-crystallin family. (258 aa)
CHMP4CCharged multivesicular body protein 4C. (184 aa)
KIAA1671KIAA1671. (1948 aa)
IFT88Intraflagellar transport 88. (815 aa)
PIK3C3Phosphatidylinositol 3-kinase catalytic subunit type 3. (882 aa)
USP30Ubiquitin specific peptidase 30; Belongs to the peptidase C19 family. (380 aa)
PWWP2APWWP domain containing 2A. (700 aa)
CETN3Centrin 3. (161 aa)
DYNC1LI1Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (432 aa)
KXD1KxDL motif containing 1. (94 aa)
TUBA8Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
PARK7Parkinsonism associated deglycase. (191 aa)
MFN2Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (755 aa)
CFTRCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1403 aa)
CHMP3Uncharacterized protein. (220 aa)
RB1CC1RB1 inducible coiled-coil 1. (1598 aa)
DYNC1I1Dynein cytoplasmic 1 intermediate chain 1. (628 aa)
MTORSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2523 aa)
GSAPGamma-secretase activating protein. (828 aa)
PINK1PTEN induced kinase 1. (473 aa)
UBE2NUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
TUBB1Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
SLC38A9Solute carrier family 38 member 9. (559 aa)
TUBE1Tubulin epsilon 1; Belongs to the tubulin family. (465 aa)
RRAGBUncharacterized protein. (367 aa)
RPS27AUbiquitin-like domain-containing protein. (156 aa)
CETN1Centrin 1. (171 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
FUNDC2FUN14 domain containing 2. (157 aa)
TUBAL3Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
UVRAGUV radiation resistance associated. (586 aa)
PRKNE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (461 aa)
PRKAA2Non-specific serine/threonine protein kinase. (523 aa)
TOMM22Translocase of outer mitochondrial membrane 22. (147 aa)
ATG4CCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (459 aa)
MAP1LC3AMicrotubule associated protein 1 light chain 3 alpha. (132 aa)
PIK3R4Phosphoinositide-3-kinase regulatory subunit 4. (1361 aa)
RPTORRegulatory associated protein of MTOR complex 1. (1330 aa)
CHMP6Charged multivesicular body protein 6. (203 aa)
ATG10Autophagy related 10. (229 aa)
SAMD15Uncharacterized protein. (88 aa)
MTMR14Myotubularin related protein 14. (595 aa)
CHMP2ACharged multivesicular body protein 2A. (171 aa)
TOMM5Uncharacterized protein. (51 aa)
UBE2V1Ubiquitin conjugating enzyme E2 V1. (147 aa)
LOC101806546Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
TUBB2BTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
MAP1LC3CMicrotubule associated protein 1 light chain 3 gamma. (143 aa)
ATG16L1Autophagy related 16 like 1. (562 aa)
TOMM20Translocase of outer mitochondrial membrane 20. (121 aa)
WIPI2WD repeat domain, phosphoinositide interacting 2. (446 aa)
ILRUNInflammation and lipid regulator with UBA-like and NBR1-like domains. (245 aa)
ATG14Autophagy related 14. (411 aa)
GABARAPL1GABA type A receptor associated protein like 1. (121 aa)
MLST8MTOR associated protein, LST8 homolog. (326 aa)
ATG4BCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (393 aa)
LAMTOR5Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5. (85 aa)
PLIN2Perilipin; Belongs to the perilipin family. (446 aa)
TUBB3Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (434 aa)
RRAGDRas related GTP binding D. (333 aa)
DYNC1H1Dynein cytoplasmic 1 heavy chain 1. (4467 aa)
TUBA1C-2Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (399 aa)
LAMTOR2Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. (102 aa)
GABARAPL2GABA type A receptor associated protein like 2. (124 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (422 aa)
U3JIF3_FICALUncharacterized protein. (265 aa)
C17orf75Chromosome 17 open reading frame 75. (350 aa)
PRKAA1Non-specific serine/threonine protein kinase. (561 aa)
DYNC1I2Dynein cytoplasmic 1 intermediate chain 2. (629 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (90 aa)
ARL13BADP ribosylation factor like GTPase 13B. (398 aa)
CHMP7Charged multivesicular body protein 7. (419 aa)
U3JFT9_FICALTubulin_C domain-containing protein; Belongs to the tubulin family. (390 aa)
CHMP2BCharged multivesicular body protein 2B. (224 aa)
TSC1TSC complex subunit 1. (1153 aa)
FUNDC1FUN14 domain containing 1. (161 aa)
RRAGCRas related GTP binding C. (364 aa)
NBR1NBR1 autophagy cargo receptor. (1017 aa)
WDR45BWD repeat domain 45B. (344 aa)
BECN1Uncharacterized protein. (407 aa)
ATMNon-specific serine/threonine protein kinase. (3066 aa)
TUBA1CTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
U3JBS1_FICALTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (489 aa)
U3JBR7_FICALTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (479 aa)
ATG4ACysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (458 aa)
PRKAG1Protein kinase AMP-activated non-catalytic subunit gamma 1. (326 aa)
ATG101Autophagy related 101. (236 aa)
ATG7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (735 aa)
PRKAB2Protein kinase AMP-activated non-catalytic subunit beta 2. (274 aa)
TXNDC11Thioredoxin domain containing 11. (973 aa)
U3JNB8_FICALUncharacterized protein. (1034 aa)
PRKAG3Protein kinase AMP-activated non-catalytic subunit gamma 3. (376 aa)
ATG9AAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (817 aa)
TUBA4ATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
PEX5Peroxisomal biogenesis factor 5. (561 aa)
DYNLL2Dynein light chain. (89 aa)
LOC101820289Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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