STRINGSTRING
U3KIB9_FICAL U3KIB9_FICAL U3KI68_FICAL U3KI68_FICAL POLR2E POLR2E SPAG16 SPAG16 U3KEQ3_FICAL U3KEQ3_FICAL GTF2H5 GTF2H5 GTF2A2 GTF2A2 GTF2A1 GTF2A1 LOC101820645 LOC101820645 POLR2L POLR2L TBPL1 TBPL1 TAF1 TAF1 TAF7 TAF7 U3K9S1_FICAL U3K9S1_FICAL GTF2H1 GTF2H1 U3K959_FICAL U3K959_FICAL GTF2A1L GTF2A1L TAF4 TAF4 CCNH CCNH CDK7 CDK7 U3K4J1_FICAL U3K4J1_FICAL POLR2J POLR2J GTF2H3 GTF2H3 U3K3S2_FICAL U3K3S2_FICAL U3K2C3_FICAL U3K2C3_FICAL TAF5 TAF5 TAF10 TAF10 POLR2H POLR2H GTF2F2 GTF2F2 U3JZA7_FICAL U3JZA7_FICAL POLR2C POLR2C POLR2I POLR2I TAF4B TAF4B POLR2B POLR2B TAF13 TAF13 POLR2K POLR2K GTF2E1 GTF2E1 TAF9 TAF9 ERCC3 ERCC3 TAF11 TAF11 TBPL2 TBPL2 POLR2D POLR2D MNAT1 MNAT1 TAF5L TAF5L TBP TBP U3JKD7_FICAL U3JKD7_FICAL TAF2 TAF2 U3JGX1_FICAL U3JGX1_FICAL TAF3 TAF3 GTF2B GTF2B TAF12 TAF12
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
U3KIB9_FICALUncharacterized protein. (494 aa)
U3KI68_FICALUncharacterized protein. (327 aa)
POLR2ERNA polymerase II subunit E. (194 aa)
SPAG16Uncharacterized protein. (289 aa)
U3KEQ3_FICALWD_REPEATS_REGION domain-containing protein. (327 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
GTF2A1General transcription factor IIA subunit 1. (337 aa)
LOC101820645General transcription factor IIH subunit. (402 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
TBPL1TATA-box binding protein like 1. (183 aa)
TAF1Transcription initiation factor TFIID subunit. (1920 aa)
TAF7TATA-box binding protein associated factor 7. (370 aa)
U3K9S1_FICALHTH TFE/IIEalpha-type domain-containing protein. (426 aa)
GTF2H1General transcription factor IIH subunit 1. (616 aa)
U3K959_FICALUncharacterized protein. (439 aa)
GTF2A1LGeneral transcription factor IIA subunit 1 like. (367 aa)
TAF4TATA-box binding protein associated factor 4. (1085 aa)
CCNHCyclin H; Belongs to the cyclin family. (288 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
U3K4J1_FICALUncharacterized protein. (254 aa)
POLR2JRNA polymerase II subunit J. (117 aa)
GTF2H3General transcription factor IIH subunit 3. (307 aa)
U3K3S2_FICALUncharacterized protein. (527 aa)
U3K2C3_FICALUncharacterized protein. (334 aa)
TAF5TATA-box binding protein associated factor 5. (779 aa)
TAF10TATA-box binding protein associated factor 10. (195 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
GTF2F2Uncharacterized protein. (240 aa)
U3JZA7_FICALTAFH domain-containing protein. (926 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
POLR2IRNA polymerase II subunit I. (63 aa)
TAF4BTATA-box binding protein associated factor 4b. (746 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1172 aa)
TAF13TATA-box binding protein associated factor 13. (115 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
GTF2E1General transcription factor IIE subunit 1. (442 aa)
TAF9TATA-box binding protein associated factor 9. (253 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (784 aa)
TAF11TAFII28 domain-containing protein. (141 aa)
TBPL2TATA-box binding protein like 2. (295 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
MNAT1MNAT1 component of CDK activating kinase. (240 aa)
TAF5LTATA-box binding protein associated factor 5 like. (573 aa)
TBPTATA-box binding protein. (302 aa)
U3JKD7_FICALUncharacterized protein. (630 aa)
TAF2TATA-box binding protein associated factor 2. (1204 aa)
U3JGX1_FICALUncharacterized protein. (882 aa)
TAF3TATA-box binding protein associated factor 3. (932 aa)
GTF2BGeneral transcription factor IIB. (285 aa)
TAF12TATA-box binding protein associated factor 12. (161 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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